Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3346 |
Symbol | |
ID | 4689043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3541921 |
End bp | 3542439 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836359 |
Product | phosphoribosyltransferase |
Protein accession | YP_983564 |
Protein GI | 121606235 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0447138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTC TGGTTCTTGA CGCCGAGGCG CTGTATGCCG ATTTGCTGCG CGGCATGCGT CAGCAACTGG CCGCCTGCAG TCAGCCGCCG CGCCTGGTGG GCGTGGCCTC GGGCGGCGCC TGGCTGGCGC AGCGCCTGCA AACAGACCTG GGGCTGGCTG AAGACATCGG CATTTTGTCG TCGTCCATGC ACCGCGACGA CTTTTCGCAG CGCGGGCTGG CGGCCAGCGG CCAGACCGTG CTGCCATTCG ATGTCAATGG CGCGCACCTG ATCGTGGTGG ACGATGTGCT CTACACCGGC CGCACGATAC GCGCCGTGCT CAATGAACTG TTCGACTACG GCCGGCCCGC CAGCGTCCGG CTGATGGTGC TGGTGGACCG GGGCGGACGC GAATTGCCGG TGCAGGCCGA CCTGGCTGTG GCCAGAGTGA GCCTGCCGGC TTCGCAAACG CTGGAACTGG CCCGCACCGA CGATGGCCGG TTCCGATTCC GCCTGCAGGA TACCCAAACC CCCGCCTGA
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Protein sequence | MSSLVLDAEA LYADLLRGMR QQLAACSQPP RLVGVASGGA WLAQRLQTDL GLAEDIGILS SSMHRDDFSQ RGLAASGQTV LPFDVNGAHL IVVDDVLYTG RTIRAVLNEL FDYGRPASVR LMVLVDRGGR ELPVQADLAV ARVSLPASQT LELARTDDGR FRFRLQDTQT PA
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