Gene Pnap_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3346 
Symbol 
ID4689043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3541921 
End bp3542439 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID639836359 
Productphosphoribosyltransferase 
Protein accessionYP_983564 
Protein GI121606235 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0447138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTC TGGTTCTTGA CGCCGAGGCG CTGTATGCCG ATTTGCTGCG CGGCATGCGT 
CAGCAACTGG CCGCCTGCAG TCAGCCGCCG CGCCTGGTGG GCGTGGCCTC GGGCGGCGCC
TGGCTGGCGC AGCGCCTGCA AACAGACCTG GGGCTGGCTG AAGACATCGG CATTTTGTCG
TCGTCCATGC ACCGCGACGA CTTTTCGCAG CGCGGGCTGG CGGCCAGCGG CCAGACCGTG
CTGCCATTCG ATGTCAATGG CGCGCACCTG ATCGTGGTGG ACGATGTGCT CTACACCGGC
CGCACGATAC GCGCCGTGCT CAATGAACTG TTCGACTACG GCCGGCCCGC CAGCGTCCGG
CTGATGGTGC TGGTGGACCG GGGCGGACGC GAATTGCCGG TGCAGGCCGA CCTGGCTGTG
GCCAGAGTGA GCCTGCCGGC TTCGCAAACG CTGGAACTGG CCCGCACCGA CGATGGCCGG
TTCCGATTCC GCCTGCAGGA TACCCAAACC CCCGCCTGA
 
Protein sequence
MSSLVLDAEA LYADLLRGMR QQLAACSQPP RLVGVASGGA WLAQRLQTDL GLAEDIGILS 
SSMHRDDFSQ RGLAASGQTV LPFDVNGAHL IVVDDVLYTG RTIRAVLNEL FDYGRPASVR
LMVLVDRGGR ELPVQADLAV ARVSLPASQT LELARTDDGR FRFRLQDTQT PA