| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3345 |
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| Symbol | pyrB |
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| ID | 4689140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3540931 |
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| End bp | 3541893 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836358 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_983563 |
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| Protein GI | 121606234 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTACC GACGAAACCC CCAACTCAAT AAAAACGGCG AGCTGATCCA TCTGCTCTCC
ACCGAAGGCC TGTCCAAGGC CATCCTGACA CAGATTCTGG ACACCGCCGC CAACTTTGTC
TCGGTCAGCA GCCGCGAGGT CAAAAAAGTC CCGCTGCTGC GCGGCAAGAG CGTGTTCAAC
CTGTTTTTTG AAAACTCCAC CCGTACCCGT ACGACGTTTG AGATTGCCGC CACGCGGCTG
TCGGCTGACG TGATCAACCT GGATATCGCC CGCTCATCGG CATCCAAGGG CGAGTCGCTG
CTCGACACCA TCGCCAACCT GAGCGCCATG GCCGCCGACC TGTTCGTCGT GCGCCACGGC
GAATCCGGCG CGCCCTACCT GATTGCCCAG CATGTCGCGC CGCATGTCCA CGTCGTCAAT
GCCGGCGACG GCCGCCATGC GCACCCGACG CAGGGTTTGC TCGACATGTA CACCATCCGC
CACTACAAAA AAGACTTCAG CAACCTCACG GTCGCCATCG TCGGCGACGT GCTGCATTCG
CGTGTGGCGC GCTCGGACAT CCATGCGCTG ACCACGCTGG GCTGCGCCGA GGTGCGCGTG
GTCGGCCCCA AGACCCTGGT TCCGGCCGAC ATGGCGCAGA TGGGCGTGCG CGTCTGCAAC
ACGCTCGAAG AAGGCATCCG GGGCGCCGAC GTGATCATCA TGCTCAGGCT GCAGAACGAG
CGCATGACTG GCGCGCTGCT GCCCAGCAGC CAGGAGTTTT CCAAGAGCTT TGGCCTGACC
ACCGACAAGC TGCAACTCGC CAGGCCCGAC GCCATCGTGA TGCATCCCGG CCCGATCAAC
CGGGGCGTGG AAATCGACTC GGCCGTGGTC GATGGCGTGC AGAGCGTCAT CTTGCCGCAG
GTCACGTTCG GCATTGCGGT CCGCATGGCC GTGATGAGCA TCGTCGCAGG CAACGAGGCA
TGA
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| Protein sequence | MLYRRNPQLN KNGELIHLLS TEGLSKAILT QILDTAANFV SVSSREVKKV PLLRGKSVFN
LFFENSTRTR TTFEIAATRL SADVINLDIA RSSASKGESL LDTIANLSAM AADLFVVRHG
ESGAPYLIAQ HVAPHVHVVN AGDGRHAHPT QGLLDMYTIR HYKKDFSNLT VAIVGDVLHS
RVARSDIHAL TTLGCAEVRV VGPKTLVPAD MAQMGVRVCN TLEEGIRGAD VIIMLRLQNE
RMTGALLPSS QEFSKSFGLT TDKLQLARPD AIVMHPGPIN RGVEIDSAVV DGVQSVILPQ
VTFGIAVRMA VMSIVAGNEA
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