Gene Pnap_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3338 
Symbol 
ID4689148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3535388 
End bp3535885 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID639836351 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_983556 
Protein GI121606227 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0249287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCC TGCAATCCTC CATCCAGTCC GCCCAGCCCG ATGCCGTCCC GGTGGTCGAG 
CCAGGCTCCT TCCTGACGCT GCACTACCGC ATGGCCGCGC CGGGCGGCGC CAGCATCATC
AACACCTTCG ACAGCAAGCC CGCCACGCTG AGCCTGGGCA ACGGCGAGTT GTCGCCGGCC
ATCGAGCAGC GCCTGCTGGG CCTGCCCGAA GGCACGCGCA CCACGTTCCA GCTGGCCGCC
GGCGAGGCTT TTGGCGAGCG CAACCCGGAA CTGGTGCAAT GGGTGGCGCG CAAGCTGCTC
AACCAGCTGG GCGACCCCGA CGAGCGCTAC AGCGTGGGCG ATGTGGTGCA GTTCCCCACG
CCCGACGGCA TGGGCCAGTA CGCCGGCGCG GTGCAACAGA TCAAGGACGG CGACGACGCG
GCGGTGCAGT TCGACTTCAA CCATCCGCTG GCCGGCCAGC CGGTGGAGTT TGAAGTGCAT
GTGATCGGGG TGCTGTGA
 
Protein sequence
MPTLQSSIQS AQPDAVPVVE PGSFLTLHYR MAAPGGASII NTFDSKPATL SLGNGELSPA 
IEQRLLGLPE GTRTTFQLAA GEAFGERNPE LVQWVARKLL NQLGDPDERY SVGDVVQFPT
PDGMGQYAGA VQQIKDGDDA AVQFDFNHPL AGQPVEFEVH VIGVL