| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3337 |
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| Symbol | ispH |
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| ID | 4689151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3534390 |
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| End bp | 3535385 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836350 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_983555 |
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| Protein GI | 121606226 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.064022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATC CACCCCTTGA AGAAATCCTG CTGGCCGAGC CGCGCGGCTT TTGCGCTGGC
GTTGACCGGG CGATTGAAAT CGTCGAGCGG GCGCTGGTCA AGTTTGGCGC ACCGATTTAT
GTGCGCCATG AAATCGTTCA CAACACCTAT GTGGTCAATG ACCTGAAGGT CAAGGGCGCG
ATTTTCATTG AGGAATTGTC CGACGTGCCA GCAGGCGCCA CCCTGGTGTT CAGCGCCCAC
GGCGTCAGCC GGGCGGTGCA GGAAGAAGCC CGGGCGCGGG GTTTCCAGAT TTTCGATGCC
ACCTGCCCGC TGGTGACCAA GGTGCATGTC GAGGTCGCCA AGCTCAACAA GGAAGGCTAC
GAGTTCATCA TGATCGGCCA CAAGGGCCAC CCCGAAGTCG AAGGCACCAT GGGCCAGCTC
GACAGCGGCA TCCATCTGGT CGAGGACGTG GCCGACGTGG CGCGCATCTC GCCGCTGCAA
ACCGAGCGCC TGGCCGTCGT CACGCAAACC ACGCTGAGCG TGGACGACGC GGCCGAGATC
AGCGCGGCCA TCGTGGCCCG GTTTCCGCAG GTGCGCAAGC CCAAGCAGCA GGACATCTGC
TACGCCACGC AAAACCGGCA GGACGCCGTC AAGGTGCTCA GCCCGCAGGT CGATATCCTG
ATCGTGGTCG GCAGCCCGAC CAGCTCGAAC AGCAACCGCC TGCGCGAACT GGCCGCCAAG
CTGGGCACCG AGGCCTACAT GGTCGATGAC GCCAGCGAAC TGCAGGAAGC CTGGTTCGAC
GGCAAGAGCC GTGTCGGCCT GACGGCGGGC GCGTCGGCCC CCGAGGTGCT GGTCAGGCAG
GTCATCGACC GCATCAAGGC GCTGGGCGCG GTGTCAGTCC GCAAGATGGA CGGAGTCGAG
GAAACCATCA AGTTCCCCTT GCCCAAGGGC CTGAAGCTGG ACGCGCAGGG CCAGCAGCTT
GAAGTCAACG GCAGCCAGCT TCACCAACTG GGCTGA
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| Protein sequence | MSNPPLEEIL LAEPRGFCAG VDRAIEIVER ALVKFGAPIY VRHEIVHNTY VVNDLKVKGA
IFIEELSDVP AGATLVFSAH GVSRAVQEEA RARGFQIFDA TCPLVTKVHV EVAKLNKEGY
EFIMIGHKGH PEVEGTMGQL DSGIHLVEDV ADVARISPLQ TERLAVVTQT TLSVDDAAEI
SAAIVARFPQ VRKPKQQDIC YATQNRQDAV KVLSPQVDIL IVVGSPTSSN SNRLRELAAK
LGTEAYMVDD ASELQEAWFD GKSRVGLTAG ASAPEVLVRQ VIDRIKALGA VSVRKMDGVE
ETIKFPLPKG LKLDAQGQQL EVNGSQLHQL G
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