Gene Pnap_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3314 
Symbol 
ID4688540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3515721 
End bp3516170 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID639836327 
Productphage P2 GpU family protein 
Protein accessionYP_983533 
Protein GI121606204 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.158033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGG CATTCGGCCA GTTCGTTTTC GGGCTGCCCA CCCTTGCATA CAACGAGCTG 
CAGCGTCAGA CCAGCTGGCG CCACCCCAGC ACCAGCCGCG TCGGCGCCCG ACCCGCCCGG
CAGTACCTCG GCCCCGGCGA CGACACCATC ACCCTGCAGG GCCTGCTCGC CCCCGAGTTC
TGCGGCAGCA CCATCAGCCT CGACCAGATC CGCGAGATGG GCGCCGCCGG CAGCGCGTGG
CCCCTGGTCG ATGGCAACGG CATCGTTCAC GGCCAGTTCG TCATCGAGAG CCTCAACGAG
ACCAGCAGCA TCTTCATGGA CAACGGCAAG GCCCGCCGCA TCGAGTTCCA GATCCAGCTG
GCCCGGGTTG ACGACGCCCG CACCGACGCC ATCGGCACCG GTACCGGCAC CACCGCCAGC
GGCGACGACG TCGTCACCTT CGACGAATAA
 
Protein sequence
MMMAFGQFVF GLPTLAYNEL QRQTSWRHPS TSRVGARPAR QYLGPGDDTI TLQGLLAPEF 
CGSTISLDQI REMGAAGSAW PLVDGNGIVH GQFVIESLNE TSSIFMDNGK ARRIEFQIQL
ARVDDARTDA IGTGTGTTAS GDDVVTFDE