| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3306 |
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| Symbol | |
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| ID | 4688550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3508784 |
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| End bp | 3510235 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836319 |
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| Product | phage tail collar domain-containing protein |
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| Protein accession | YP_983525 |
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| Protein GI | 121606196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.377169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTT TTAAAACCAT TCACACCCTC TACGGCCTGC AGCGCCTGGC TGCGGCCGAG
GCCAGCGGCA CGCCAATCAA CCTGCCCACG ATGGCGGTCG GCGATGGAAA CGGCAATCCG
GTAGAGCCCG GCGAACTGCA GGCGGTCCTC GTGCGCGAGC GTTACCGCGC CGCTGTCAAC
CGCGTGTACC AGGACCCCGA CACGCCGACC AAATTCTTTT GTGAAATGGT GATCCCGGCC
GCAACGGGTG GCTTCACGCT GCGCGAGTTC GGTGTTTTTG ATGACGCCGG CGGTCTTTTC
GTCGTCGGCA ACCTGCCCGA CATGTACAAG CCGACCCCGG CCGATGGCGC ATTTTCGGAC
ACCATCTTGC GCGTCGAGTT CAGCGCCCAG AACGCCACGC TCATTACGCT GCAGATCGAC
CCCAACGTCG CGGTTGCCTC GCAATCCTGG GTGATCAACA ACATCACCAT GCAATCCCTG
ATCCCGGGCG GCACCACCGG CCAGCTGCTG CGCAAGACCA GCAATGCCGA CGGCGACATG
GAATGGGGAA GCCCTGACGA TGTCACCATC ACGGTGGACA CGATCGAGGA AGCGCAGACC
CTGGCCGCCG ACCAGCTTGT CGTTGACCTG GTCGCGACCA CCACGCGCGG CCTGGCCCTC
TACATCGACG GCAACCGCCT GCGCCGAGAC CAGTGGACAG CCGACCCCGT CATCGTCACC
CGCCTGAGCC TGGCCGTGTC GTATGCCGCC GGCACGCGCC TGATCTGCAG CCAGAACGAG
CCCACCGGCA GCGCACCGGC ACCGCTGGAG CGCAGCCTCA ACCTGTCCGA TGTGCCCAAT
CCGGCCACAG CCCGTGCCAA TCTGGGCGTG TACAACAAGG AAGAATCCGA TCGGGCCGGC
CAGCCTGGCC ATATCAACTA CACAGCCCGT AGCACCGCGC CCCCCGGCTG GCTAAAGGCC
AATGGCGCCG GGATCAGCCG CACGGCCTAC GCAGCACTCT TCGCCGCGAT CGGAACGACT
TTTGGTGTTG GCGATGGCTT CAACACGTTC AACTTGCCTG ACCTTCGCGG CGAGTTCATC
CGTGGCTGGG ACGATGGGCG CGGCGTCGAT GGCAGCCGGT CCTTGGGCTC GTCACAGGCC
GGTGAAACCG CAAGCCATGG CCATACAGGC TCGACCTCTG CAGCCGGCAT ACATGCCCAC
GGTGTTAACG ACCCGGGCCA CAGCCATCAG GTGACCCAAG AAGGCGGCAG GAATACGTCT
TTGGCCTACC AAAACGGTCC CAATAGCGCT TTCCGAGGTG AGGTGTCCAC GCTACTGGAG
ACCACTCGGA ACGCAACTGG GATTGGCATT TCCGAGAACG GCAACCACAG CCACACCGTC
ACCATCAGCG CCACCGGCGG CAGTGAAACG CGTCCCCGCA ACCTGGCCCT GCTGGCTGTC
ATCAAGTTCT GA
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| Protein sequence | MPTFKTIHTL YGLQRLAAAE ASGTPINLPT MAVGDGNGNP VEPGELQAVL VRERYRAAVN
RVYQDPDTPT KFFCEMVIPA ATGGFTLREF GVFDDAGGLF VVGNLPDMYK PTPADGAFSD
TILRVEFSAQ NATLITLQID PNVAVASQSW VINNITMQSL IPGGTTGQLL RKTSNADGDM
EWGSPDDVTI TVDTIEEAQT LAADQLVVDL VATTTRGLAL YIDGNRLRRD QWTADPVIVT
RLSLAVSYAA GTRLICSQNE PTGSAPAPLE RSLNLSDVPN PATARANLGV YNKEESDRAG
QPGHINYTAR STAPPGWLKA NGAGISRTAY AALFAAIGTT FGVGDGFNTF NLPDLRGEFI
RGWDDGRGVD GSRSLGSSQA GETASHGHTG STSAAGIHAH GVNDPGHSHQ VTQEGGRNTS
LAYQNGPNSA FRGEVSTLLE TTRNATGIGI SENGNHSHTV TISATGGSET RPRNLALLAV
IKF
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