Gene Pnap_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3303 
Symbol 
ID4688741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3505423 
End bp3506100 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID639836316 
Productphage tail protein I 
Protein accessionYP_983522 
Protein GI121606193 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG CTGCCACGCT GCTGCCGCCC AACTCGACCA CGCTCGAACG CGCTGCAGCC 
CAGACCACCA GCCGCCTCGA TGCCTTGCCC ACGCCCTTGC GCGAGGTGTG GGACCCTGCT
GCCTGCCCCG TGGGTGTCCT GCCTTGGCTG GCCTATGCCT TCGGGGTTGA GGACTGGTCA
CCGCAATGGA CCGAAGCCCA GCGGCGCGAA GTCATCACCC AGTCCATCCC GCTCAAGCGG
CACCGGGGCA CCATCGGCGC CGTGCAGGCC GCCATCAATG CCCTGGGCGT GACTGGCCGC
GTCCAGGAAT GGCACAGGCA GATCCCGGCC GGCGCACCCT ACACCTACAA ACTGCTTTTG
GAGGTGGACC AGACCGGTTA CAGCCTGGAG CAGCTGATCC AGCTGCTCCA GATCGTCGAG
CGCTCGAAGA ATTTGCGCTC GCATCTGCAA ACGATCATCC CGTCAGCCAT TGCGCGCTCA
GGCCTTGTCG TCGCGGCCAT CGCCTCAACA GGCAGTCAGA TCGATGTCAC CTCTGGCACA
CCAACGTATG CCGATGGCAC ACCCGCCCTG GATCTGCTGA TCGATGCCGC GCTCAATGGC
GAAGCCAGCA CGATCGGCGC CATCAATGCC CTTTATCTCA GCCTGCACAC CACGATGCCG
GCGATCAACT ATTGGTAA
 
Protein sequence
MPEAATLLPP NSTTLERAAA QTTSRLDALP TPLREVWDPA ACPVGVLPWL AYAFGVEDWS 
PQWTEAQRRE VITQSIPLKR HRGTIGAVQA AINALGVTGR VQEWHRQIPA GAPYTYKLLL
EVDQTGYSLE QLIQLLQIVE RSKNLRSHLQ TIIPSAIARS GLVVAAIAST GSQIDVTSGT
PTYADGTPAL DLLIDAALNG EASTIGAINA LYLSLHTTMP AINYW