| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3302 |
|---|
| Symbol | |
|---|
| ID | 4688562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3504543 |
|---|
| End bp | 3505430 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639836315 |
|---|
| Product | baseplate J family protein |
|---|
| Protein accession | YP_983521 |
|---|
| Protein GI | 121606192 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TCACCCTCTT ACCCGCGCCC AACGTCGTCG AGCCGCTGGA CTATGAAAGC
ATCCTGGCCG CGCTCAAGGA TCTGGCCGTC ACACAAGAGC CCACGCTGGC CAGCGCCCTG
CAATACGAGT CCGAGCCGCT GACCAAGCTG CTCCAGGTGT ATGCCTACCG CGAGCTCGTG
CTGCGCCAGC GCATCAACGA CGCCGCCCGT AGCGTCATGC TCGCCTACGC CGCCGGCAGC
GACCTCGACC AGATCGGCGC CCGGTATGAC GTTGCCCGCC TGCTCATCCA GCCCGCCGAC
ATCGATGCCG TCCCGCCGGT CGAAGCCGTC TATGAGTCCG ACGCCGCCTT TCGCCGCCGC
ATTCTCCTGA GCCTGGACGC CTACACCACC GCCGGCAGCC AGGGCAGCTA CATCTTCCAT
GCGCTGTCGG CCAGCGGCGA CGTGCTCGAT GCCGCGGCCA CCAGTCCGGC GCCCGGCCAG
GTCACGGTCT ATGTGCTGTC CCGCCTGGAT GACGGCACCG CCTCGGCCGA GCTGCTCGCC
GCCGTCACGG CCGCCGTCAA TGCCGAGCTC ACGCGCCCCA TGACCGACCA GGTCACCGTG
CTGTCCGCCT CGATCATCAA TTACGCGATC GCCGGCACGC TCATCGTCTC GCACGGCCCC
GACCCGGAGA CGGTGCGCAC GGCCGCCCTG CTTGCAGCCA CCCAGTACGC GGCCGACATG
CACCGCATGG GCTTTGACAT CAGCCTGTCG GGTGTGTACC GCGCCCTGCA CCAGCCTGGC
GTGCTGCAGG TCAACCTCGA CTCGCCTGTG GCCAACATTG CGGTCTCTAG CGGCCAGGCG
ACCCATTGCA CCAGCATCAC CCTGGACGTC GAGGTGTCCA ATGCCTGA
|
|---|
| Protein sequence | MIDLTLLPAP NVVEPLDYES ILAALKDLAV TQEPTLASAL QYESEPLTKL LQVYAYRELV
LRQRINDAAR SVMLAYAAGS DLDQIGARYD VARLLIQPAD IDAVPPVEAV YESDAAFRRR
ILLSLDAYTT AGSQGSYIFH ALSASGDVLD AAATSPAPGQ VTVYVLSRLD DGTASAELLA
AVTAAVNAEL TRPMTDQVTV LSASIINYAI AGTLIVSHGP DPETVRTAAL LAATQYAADM
HRMGFDISLS GVYRALHQPG VLQVNLDSPV ANIAVSSGQA THCTSITLDV EVSNA
|
|---|
| |