| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3301 |
|---|
| Symbol | |
|---|
| ID | 4688561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3504175 |
|---|
| End bp | 3504546 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639836314 |
|---|
| Product | GPW/gp25 family protein |
|---|
| Protein accession | YP_983520 |
|---|
| Protein GI | 121606191 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3628] Phage baseplate assembly protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TCATCGGCAT GGCCCGCAGC AGTGGCCGCC AGGCCTCGGG CATCGACCAC
CTGCGCCAAA GCATCGCCGA CATCCTGACC ACCCCCATCG GCACCCGCCT GATGCGCCGC
GACTACGGCA GCCTGCTGCC CGAGCTGATC GACCACCCCG CCAATGGAGC CAACAAAGTG
CGAATCTATG CAGCCACCGC CGGCGCGCTC ATGAAATGGG AGCCACGCCT GCGGCTCTCG
CGCGTCCAGA TCAACAGCGG CGAGCGGGCC GGGCAGCTCA TCATTGACAT CGAGGGCCTG
TACACCCCGC CCGGCCAGTC CAGCAGCGTG CTGAGCCTGC GCATGCCGCT GCAGATGGGC
GCTGCAGCAT GA
|
|---|
| Protein sequence | MTQIIGMARS SGRQASGIDH LRQSIADILT TPIGTRLMRR DYGSLLPELI DHPANGANKV
RIYAATAGAL MKWEPRLRLS RVQINSGERA GQLIIDIEGL YTPPGQSSSV LSLRMPLQMG
AAA
|
|---|
| |