Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3296 |
Symbol | |
ID | 4688572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3501536 |
End bp | 3502048 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639836309 |
Product | prophage LambdaSo, lysozyme, putative |
Protein accession | YP_983515 |
Protein GI | 121606186 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.938297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA GGATGCGCAT ATTTGTAGCC GCGTTGACAC TCAGCGCGGC TGGCTTCATC GGCATCGTCA GCGATGAAAG CTACACCAGC GCAGCGATCA TCCCGACCAA AGGCGACGTT CCCACGGTCG GCTTTGGCTC GACGGTCTAT GAAGACGGCC GGCCGGTGAA GATGGGCGAC ACGATCACGC CGGTCCGCGC GCTGGTCGTC GCCTCTGCGC ATATCGACAA GGACGAAGCC CGGTTCCGTG CCTCCCTGCC GGATGTGGAG CTGTTCCAGG AAGAATATGA CCTGTACCTG AACTGGGTCT ACCAGTTCGG GATCGGCAAC TGGAGAAAAT CCAGCATGCG CCGCGAGCTG CTCGCAGGCC ACTATCCGGC CGCGTGCCAT GCCTTGCTCG AATACAAAAA ATCTGCAGGC TACGACTGCT CCACGCCCGG CAACAAGATC TGCGCAGGCG TCTGGACCCG TCAGCTCAAG CGCCACGCGA AGTGCATGGC GGCGCAGGCA TGA
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Protein sequence | MSTRMRIFVA ALTLSAAGFI GIVSDESYTS AAIIPTKGDV PTVGFGSTVY EDGRPVKMGD TITPVRALVV ASAHIDKDEA RFRASLPDVE LFQEEYDLYL NWVYQFGIGN WRKSSMRREL LAGHYPAACH ALLEYKKSAG YDCSTPGNKI CAGVWTRQLK RHAKCMAAQA
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