Gene Pnap_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3296 
Symbol 
ID4688572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3501536 
End bp3502048 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content61% 
IMG OID639836309 
Productprophage LambdaSo, lysozyme, putative 
Protein accessionYP_983515 
Protein GI121606186 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.938297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA GGATGCGCAT ATTTGTAGCC GCGTTGACAC TCAGCGCGGC TGGCTTCATC 
GGCATCGTCA GCGATGAAAG CTACACCAGC GCAGCGATCA TCCCGACCAA AGGCGACGTT
CCCACGGTCG GCTTTGGCTC GACGGTCTAT GAAGACGGCC GGCCGGTGAA GATGGGCGAC
ACGATCACGC CGGTCCGCGC GCTGGTCGTC GCCTCTGCGC ATATCGACAA GGACGAAGCC
CGGTTCCGTG CCTCCCTGCC GGATGTGGAG CTGTTCCAGG AAGAATATGA CCTGTACCTG
AACTGGGTCT ACCAGTTCGG GATCGGCAAC TGGAGAAAAT CCAGCATGCG CCGCGAGCTG
CTCGCAGGCC ACTATCCGGC CGCGTGCCAT GCCTTGCTCG AATACAAAAA ATCTGCAGGC
TACGACTGCT CCACGCCCGG CAACAAGATC TGCGCAGGCG TCTGGACCCG TCAGCTCAAG
CGCCACGCGA AGTGCATGGC GGCGCAGGCA TGA
 
Protein sequence
MSTRMRIFVA ALTLSAAGFI GIVSDESYTS AAIIPTKGDV PTVGFGSTVY EDGRPVKMGD 
TITPVRALVV ASAHIDKDEA RFRASLPDVE LFQEEYDLYL NWVYQFGIGN WRKSSMRREL
LAGHYPAACH ALLEYKKSAG YDCSTPGNKI CAGVWTRQLK RHAKCMAAQA