Gene Pnap_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3293 
Symbol 
ID4688532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3500647 
End bp3501111 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID639836306 
Productphage head completion 
Protein accessionYP_983512 
Protein GI121606183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC TGAGCAACCC GCCCACGCCC ACGGAAGAAG CCATCATCAC CAATGACGGC 
TTTTTCCCCG ACATCGAGCC GCTCAAGCTG CGCGCCTTTG CGCGGCTCGA CGGCACGGTC
ACCGTGGATC GGCTGACCTA CAGCATCCTG AGCGCTATTG CGTCGGTCAA TGCCGAGCTG
TGGCAGTTCA AGTCGTCCCA GCAGCAGCTC GGCATCAGCA CGCTGGCTGC AGTGCCGGCT
GACCAGATCG CCGGCGTCAA TGTGAAGGTC ATCCACTACC TGCGCGCCGT GTACAGCGCG
GTGCAGGCCG ACCTGATCGA GCACTACCGG GACTTTGACA CTACCGGCGC CGGCGACAAA
GCCGCCGAAA AGCTGGAGCA GCGCACCAAC GATCTGCGGC GCAACATGCG CTGGGCCATC
AGCGACCTGC TGGCCATCCG GCGAAACACC GTCGAGCTGA TCTGA
 
Protein sequence
MSFLSNPPTP TEEAIITNDG FFPDIEPLKL RAFARLDGTV TVDRLTYSIL SAIASVNAEL 
WQFKSSQQQL GISTLAAVPA DQIAGVNVKV IHYLRAVYSA VQADLIEHYR DFDTTGAGDK
AAEKLEQRTN DLRRNMRWAI SDLLAIRRNT VELI