| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3289 |
|---|
| Symbol | |
|---|
| ID | 4688549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3495995 |
|---|
| End bp | 3497785 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639836302 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983508 |
|---|
| Protein GI | 121606179 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5484] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.699131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTG ATGCGCCCGT TCTCGCTCCC AAAATACCTC ACCTGGTCGA AGAGTCCCCG
GTGGCCGAAC TGCGCCGCAC GGCCCGGCAT TTGTACTGGC AGGGCTGGCG CCTGTCGAGT
ATCGCGGAGT TTCTCACAAC ACCGCGCAGC ACCCTGCAGG GCTGGAAGGA TGCCGAAAAA
TGGGAAGACG CGCAACCCAT CCAGCGCGTC GAGGGTGCCC TGGAGTGCCG GCTGGTCCAG
CTGATCGCCA AGGACGGCAA GACCGGCGGC GACTTCAAGG AGATCGATCT GCTCGGGCGC
CAGGTCGAGC GGCTTGCCCG GGTGCGCAAG TACGACCAGA CCGGCAAGGA AGCCGACCTC
AACCCGGAGA TCGAGCGGCG AAATAGCGGG CCGAAGAAAA AACCCAAGCG CAATTTCTTC
ACCGAAGACC AGATCGGCGA GGTGCAGGCG GCGTTCCGCG ACTCGCTGTT CGGGCATCAG
AAAGTCTGGC TGCGCAACGG CGAGCGCACG CGGATGATCC TCAAATCGCG GCAGATCGGC
GCGACCTGGT ACTTTGCCCG GGAAGCGCTG TGCGATGCGC TGGCCACGGG CCGCAACCAG
ATTTTCCTGT CGGCCAGCAA GGCCCAGGCG CACATCTTCA AGCAGTACAT CCAGCAGTTT
GCGAACGAGG CCTGCGGCGT GACGCTGTCA GGCGATCCGA TCGTGCTGGA CAACGGCGCC
GAGCTGCACT TCCTGGGCAC GAATGCCCGC ACGGCCCAGG GCTACCACGG CAATTTCTAC
TTTGACGAGT TCTTCTGGAC GCACCGGTTC GAGGAGCTCA ACAAGGTGGC CAGCGGCATG
GCCATGCACA AGCAGTGGCG CAAGACCTAC TTTTCCACGC CCAGCTCGAT CCAGCACGAG
GCCTATGCGC TGTGGAGCGG CGCGCGGTTC AACAAGCGCC GGCCCAAGAA CGAGCGGATC
GCGCTGGACC TGACGCATGA GCGCCTGGCC GGCGGCTTCA CGGGCGAGGA CCGCGTCTGG
CGCAACATCG TCAACATCCT GGATGCGGCC GCAGGCGGCT GCGATCTGTT CGACATCGAC
GAGCTGCGCC TGGAGTACTC GACCGAAGAG TTTGAAAACC TCTTGATGTG CGGCTTCATC
GACGACACCC AGTCGGTGTT TCCGATGGCC GAGTTGCAGA AATGCATGGT CGATTCCTGG
GTGGACTGGG AAGACTACAA GCCCTTCACG GCGCGGCCGT ATGGCTACCG GGCGGTCTGG
GTGGGCTACG ACCCATCGCA CACGGGCGAC ACGGCCGGCT GCGTGGTGCT CGCCGCGCCA
CTCACGCCAG GCGGCAAGTT CCGCGTGCTG GAACGTCACC AGTGGCGCGG CCTGGACTTC
GAGGCCCAGG CCGAAGCGAT CAGGCAGATC ACGCTGCGCT TCAATGTGCA GCACATCGGC
ATCGACACGA CCGGGCTGGG CCAGGGCGTG TACCAGCTGG TGAGCAAGTT CTTCCCGGCG
GCCCAGTCGA TCAACTATTC GGTCGAGGTC AAGACGCGCC TGGTGCTCAA GGCCAAGAGC
GTGATCAGCA AAGGGCGGCT GGAGTTTGAC GCCGGCGCGG TGGACCTGGC GCATGCGTTC
CTGGCCATCC GCCGGGCGTT GACGGCCAGC GGCCGCAATG TGACCTTTGA ATCCGGCCGG
TCCGATGACA CCGGGCACGC CGACCTGGCC TGGGCCTGCA TGCACGCGCT CGACAACGAA
CCCCTTGAGG GGCAAACATC TGCCAATCGT GGCTTTATGG AGATTTCTTG A
|
|---|
| Protein sequence | MSTDAPVLAP KIPHLVEESP VAELRRTARH LYWQGWRLSS IAEFLTTPRS TLQGWKDAEK
WEDAQPIQRV EGALECRLVQ LIAKDGKTGG DFKEIDLLGR QVERLARVRK YDQTGKEADL
NPEIERRNSG PKKKPKRNFF TEDQIGEVQA AFRDSLFGHQ KVWLRNGERT RMILKSRQIG
ATWYFAREAL CDALATGRNQ IFLSASKAQA HIFKQYIQQF ANEACGVTLS GDPIVLDNGA
ELHFLGTNAR TAQGYHGNFY FDEFFWTHRF EELNKVASGM AMHKQWRKTY FSTPSSIQHE
AYALWSGARF NKRRPKNERI ALDLTHERLA GGFTGEDRVW RNIVNILDAA AGGCDLFDID
ELRLEYSTEE FENLLMCGFI DDTQSVFPMA ELQKCMVDSW VDWEDYKPFT ARPYGYRAVW
VGYDPSHTGD TAGCVVLAAP LTPGGKFRVL ERHQWRGLDF EAQAEAIRQI TLRFNVQHIG
IDTTGLGQGV YQLVSKFFPA AQSINYSVEV KTRLVLKAKS VISKGRLEFD AGAVDLAHAF
LAIRRALTAS GRNVTFESGR SDDTGHADLA WACMHALDNE PLEGQTSANR GFMEIS
|
|---|
| |