| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3288 |
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| Symbol | |
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| ID | 4688548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3494949 |
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| End bp | 3495995 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836301 |
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| Product | PBSX family phage portal protein |
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| Protein accession | YP_983507 |
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| Protein GI | 121606178 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACG CAGTGGCAAT GATCGATAAC GTGATGCCTG TCCAGGCCAG CCAGGCAGCT
GGCCAGGCCC GGATGGAGGC CTTCAGCTTC GGCGATCCCG AACCGGTGAT GGACAACCGG
GAGATCCTGG ATTACATCGA GTGCTGGATG AATGGCCGCT GGTATGAGCC GCCGGTCAGC
CTGGAAGGCC TGGCCAAGTC GTTCCGGGCC AGCACGCACC ACAGCAGCTC GATCTACTTC
AAGCGCAACA TCCTGCTGAG CACCTTCCAG CCGCATCCGC TGCTCGACCG GGCGACGTTC
AGCGGCTATG CGCTGGACTT CCTGACCTTT GGCAATGCCT ACCTGGAGCG GCGCACGTCG
CGCACGCTGC GCGCTGTCAA GCTGGAGCAT GCCTTGGCCA AGTATGTGCG GCGCGGCGCG
GATCTGGAGC AATACTTTTT CGTGCGCGGC TGGCGTGACG AGCACGAGTT CCCGGCAGGC
AGCATCTATC ACATGCGCGA ACCGGACATC AATCAGGAGG TGTACGGCCT GCCTGAATAC
CTGAGCGCCC TGCAATCAGC TTGGCTGAAT GAATCCGCGA CGCTGTTTCG CCGGCGCTAC
TACAACAACG GCTCGCATGC CGGCTTCATC CTGTACGTCT CGGACCCGGC CCAGCAGCAG
GAGGACATCG ATGCGATGCG CACCGCACTG AAAAATTCCA AGGGGCCGGG CAACTTTCGC
AACCTGTTCC TGTATTCGCC CAACGGCAAG AAGGATGGCA TTCAGCTGAT CCCCGTGAGT
GACGTGTCGG CCAAGGATGA GTTCTTCTCG ATCAAGAACG TGAGCCGCGA CGATGTGCTG
GCCGCCCATC GCATCCCGCC CCAGCTGCTG GGCATCGTGC CGAGCAATAC CGGCGGCTTC
GGTGCCGTGC TGCCAGCAGC CCAGGTCTTT GCCAGGAACG AGATCGTGCC GCTCCAGGAA
CGATTCAGGG AACTCAACGA CTGGATGGGC GAGGAAGTTG TCCGGTTTGT GCCCTATGTC
GTGCCGACCG ATGAGAAGGT TGCCTGA
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| Protein sequence | MDNAVAMIDN VMPVQASQAA GQARMEAFSF GDPEPVMDNR EILDYIECWM NGRWYEPPVS
LEGLAKSFRA STHHSSSIYF KRNILLSTFQ PHPLLDRATF SGYALDFLTF GNAYLERRTS
RTLRAVKLEH ALAKYVRRGA DLEQYFFVRG WRDEHEFPAG SIYHMREPDI NQEVYGLPEY
LSALQSAWLN ESATLFRRRY YNNGSHAGFI LYVSDPAQQQ EDIDAMRTAL KNSKGPGNFR
NLFLYSPNGK KDGIQLIPVS DVSAKDEFFS IKNVSRDDVL AAHRIPPQLL GIVPSNTGGF
GAVLPAAQVF ARNEIVPLQE RFRELNDWMG EEVVRFVPYV VPTDEKVA
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