| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3284 |
|---|
| Symbol | |
|---|
| ID | 4688719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3489028 |
|---|
| End bp | 3489504 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639836297 |
|---|
| Product | dehydratase |
|---|
| Protein accession | YP_983503 |
|---|
| Protein GI | 121606174 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.904701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC TGAACGGCTA TGACATCGAA GACCTGAGCG TGGGCATGAT GGCCATATTT
TCCAAGACCA TCACCGAAGC CGACATCGTG CTGTTTGCCG GCGTGTCGGG CGACTGCAAC
GCCATCCATA TCAACGAAGA GTACGCGGCC ACCACGGCGT TCAAGGGCCG CATCGCCCAC
GGTTTCCTGT CGGCCAGCGT GATCTCGGCG GCGGTCGCCA ACCGTCTGCC CGGCCCCGGC
GCCATCTACA TGGACCAGCA CCTGAAGTTC CTGGCGCCGG TGCGCCCCGG CGACACCGTG
CATGCCACCG TCAAGGTGCG CGAGGTCATC GCCGAGCGTG GCCGCGTGGT GCTGCAGACC
ACCTGCAGCG TCAAGGGCGT CATGGTCATT GACGGCGAAG CGCTGGTGAA GGTCGATTCG
TCCGCCCGGC GCGCGCTCAA GGCGGCCGCC CTGTCCGCCG CCCAGGCCAT CGCCTGA
|
|---|
| Protein sequence | MNDLNGYDIE DLSVGMMAIF SKTITEADIV LFAGVSGDCN AIHINEEYAA TTAFKGRIAH
GFLSASVISA AVANRLPGPG AIYMDQHLKF LAPVRPGDTV HATVKVREVI AERGRVVLQT
TCSVKGVMVI DGEALVKVDS SARRALKAAA LSAAQAIA
|
|---|
| |