| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3278 |
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| Symbol | |
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| ID | 4687873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3480892 |
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| End bp | 3482211 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836291 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_983497 |
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| Protein GI | 121606168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.304341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCA CCGCTTCACC ATCGCCGCAG CGCTTCCTGA CCGGCATCAC GACCACCGGA
ACGCCGCACC TGGGCAACTT CGTCGGCTCC ATCCGCCCTT CGGTGGCAGC CAGCCGCCTG
CCCGGCGTGC AGAGTTTTTA CTTTCTGGCC GACTACCACG CGCTGATCAA GTGCGGCGAC
CCGGTGCGCA TCCAGCGCTC GACGCTGGAA ATCGCCGCCA GCTGGCTGGC CGCCGGGCTG
GAGCCGGAAC GCGTCATGTT CTACCGCCAG TCCGACATTC CTGAAATCAC CGAACTCACC
TGGCTGCTGA CCTGCGTGAC CGGCAAGGGC GTGCTGAACC GCGCGCACGC CTACAAGGCT
TCGGTCGATA AGAACGAAGC CGCCGGAAAC GACCCGGACG CCGATGTCAC CGCCGGCCTG
TTCATGTACC CGGTGCTGAT GGGCGCCGAC ATTTTGCTGT TCAAGGCGCA CAAGGTGCCG
GTCGGGCGCG ACCAGGTCCA GCACATCGAG ATGGCGCGCG ACATGGCCCA GCGCTTCAAC
CACCTGTACG GCGAGCACCT GGTGCTGCCC GAAGCCCAGA TCGAGGAATC CGTCGCCCTG
CTGCCCGGCC TGGACGGGCG CAAGATGAGC AAGAGCTACG ACAACACGAT TCCGCTGTTC
ACCCCGCGCG AGCAGTTGCG CAAGCTGATC GCCGGCATCG TGACCGACTC GCGCGCGCCC
GGCGAAGCCA AGGACACCGA AGGTTCGGCG CTGTTCCAGA TTTACCAGGC CTTTGCCAGC
GAGCCAGAAA CCGCTGGTCT GCGCCAGGCC TATGCCGACG GCATTGGCTG GGGCGATGCG
AAGCAGATGC TGTTCGAGCG CATCGACCAG GAAGTCGCGC CGATGCGCGA GCAGTACCAG
GCGCTGATCG GCAATCCAGC CAAAATCGAA GCGCTGCTGC AGGCCGGCGC GGAAAAAGCA
CGGGCGGTGG CAACGCCGTT CATGGGCGAG TTGCGGCGCG CGGTGGGCCT GCGCAACCTG
GGGTCCGCCG CCCCAGCCGC CGCCAAAAGC AAGGCCGCCA AAACGGCGGC ACCAGCCTTC
AAGCAATACC GCGAAAAAGA CGGCCGGTTT TATTTCAAGC TGCTTGATGC CGAGGCGCAG
TTGCTGCTGC AAAGCCAGGG TTTCGATTCA CCCCGGGAAG CTGCCCTCGT CATTGGCCGG
TTGCAAAAAG AAGGCTCGGC CGCGCTGGCC GGCCTGCATG ACAAGCTGCA GGCCATGGAA
GGAATCACCG CAAGCCAGCT GGACAGCGCC CTGAAGTTCT TTGCACCGGA AGAATCCTGA
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| Protein sequence | MNSTASPSPQ RFLTGITTTG TPHLGNFVGS IRPSVAASRL PGVQSFYFLA DYHALIKCGD
PVRIQRSTLE IAASWLAAGL EPERVMFYRQ SDIPEITELT WLLTCVTGKG VLNRAHAYKA
SVDKNEAAGN DPDADVTAGL FMYPVLMGAD ILLFKAHKVP VGRDQVQHIE MARDMAQRFN
HLYGEHLVLP EAQIEESVAL LPGLDGRKMS KSYDNTIPLF TPREQLRKLI AGIVTDSRAP
GEAKDTEGSA LFQIYQAFAS EPETAGLRQA YADGIGWGDA KQMLFERIDQ EVAPMREQYQ
ALIGNPAKIE ALLQAGAEKA RAVATPFMGE LRRAVGLRNL GSAAPAAAKS KAAKTAAPAF
KQYREKDGRF YFKLLDAEAQ LLLQSQGFDS PREAALVIGR LQKEGSAALA GLHDKLQAME
GITASQLDSA LKFFAPEES
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