| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3274 |
|---|
| Symbol | |
|---|
| ID | 4688139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3477743 |
|---|
| End bp | 3478606 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639836287 |
|---|
| Product | phosphotransferase domain-containing protein |
|---|
| Protein accession | YP_983493 |
|---|
| Protein GI | 121606164 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.156936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCTC AAAACATCCT GAACGCCGAC CTGCATTGCC ATTCGGTTGT CTCCGACGGC
ACCCTGACCC CCGAAGCACT GGCGGAGCGC GCCAAAAACA ACGGCGTCGA GTTGTGGGCG
CTGACCGACC ACGACGAAAT CGGCGGCCAG CACCGCGCTG CAGCGGCAGC GAAGGCGCAA
GGCATGGCCT ACCTCACCGG CACCGAGATT TCCGTGACCT TTGCCGGCGA AACCGTTCAC
ATCGTGGGCC TGGGTTTTGA TCCTGACGAT GCAGCCCTGA AGCAGGGCCT GCACAACACC
CGCAACGGCC GCGAGCAGCG GGCCATGGAA ATGTCCGATT CACTGGCCAA GGTCGGCATC
CACGGCGCTT TTGAAGGCGC CCTGAAATTT GTCGGCAACC CCGAGCTGAT CTCGCGCACC
CACTTTGCCC GCTATCTGGT GGAGTCCGGC GTCTGCAAGG AAACCAATGA GGTCTTTCGC
AAATACCTGA CCGAAGGTAA GCCCGGCTAC GTGCCGCACC GCTGGGCCAC CTTGAAGGAT
GCCGTCACCT GGGTCACGCA AGCGCAGGGC ATCGCCGTCA TTGCGCATCC GGGCCGCTAC
AACTTCTCGG CCAACGAGGA ATACGCGCTG TTCACCGAAT TCAAGGCGCA CGGCGGACGC
GGCGTGGAAG TGGTCACCGG CAGCCACACC AGGCAGGAAT TCGTGAAATA CGCCGAAACC
GCCAAGGAGT TCGGCCTGGC CGCCTCGCGC GGCAGCGACT TTCACAGCCC TGACGAAAGC
CACACCGACC TGGGCGCCCT GCCCTTCCTG CCGGGCGACC TGACGCCGGT GTGGGAGTTG
CTGGCGGACC GCATCCAGGC ATGA
|
|---|
| Protein sequence | MKPQNILNAD LHCHSVVSDG TLTPEALAER AKNNGVELWA LTDHDEIGGQ HRAAAAAKAQ
GMAYLTGTEI SVTFAGETVH IVGLGFDPDD AALKQGLHNT RNGREQRAME MSDSLAKVGI
HGAFEGALKF VGNPELISRT HFARYLVESG VCKETNEVFR KYLTEGKPGY VPHRWATLKD
AVTWVTQAQG IAVIAHPGRY NFSANEEYAL FTEFKAHGGR GVEVVTGSHT RQEFVKYAET
AKEFGLAASR GSDFHSPDES HTDLGALPFL PGDLTPVWEL LADRIQA
|
|---|
| |