| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3268 |
|---|
| Symbol | |
|---|
| ID | 4688037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3471912 |
|---|
| End bp | 3473015 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639836281 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_983487 |
|---|
| Protein GI | 121606158 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TCACGCCCAC GATACCGTCC AACCAGCACG CTGCGCCACC CGCCGCCATT
GAACTGGTGG CCCTGACCAA GCGCTATGCG CAAGGCAGCC CGGCGGTGGA CAGCATCAAC
CTGCGCATCA CCAGCGGCAG CTACTGCTGC CTGCTCGGGC CGTCGGGCTG CGGCAAAAGC
ACCACGCTGC GCATGATCGC GGGCCATGAG TCGGTGAGCA GCGGCGACAT CCTGCTGGAA
AACCGCAACA TCACCAACCT GCCCGCCGCC CAGCGCGGCA CGGCCATGAT GTTCCAGAGC
TTCGCGCTGT TTCCGCACCT TTCGGCGCTC GACAACGTGG CCTTCAGCCT GAAGATGAAG
GGCATGGGCA AGGCCGAGCG CCATACCCGG GCCAAGGATT TGCTCGACCG CGTGGCGATG
GGCGCGCTGG CCGAACGCAA GCCGGCCGAA CTCTCGGGCG GCCAGCAGCA GCGCGTGGCG
CTGGCTAGAG CCCTGATCAC CCAGCCCAAA GTCCTGCTGC TTGACGAACC GCTGTCGGCG
CTCGACCCGT TTTTGCGCAT CCAGATGCGC GCCGAGCTGC GCCGCTGGCA AAAGGAGCTG
GGCCTGACCT TCATCCACGT CACCCATTCG CAGGAAGAAG CGATGGCGCT GGCCGACACC
ATGGTGGTGA TGAACCACGG GCTGATCGAG CAGGTCGGCT CGCCGCACGA AATCTATAAC
CGGCCGGCCA GCGAATTCGT CGCGCGCTTC ATGGGCGGCC ACAACGTGCT CGACACCCCC
GCCGGCAAGA TCGGCGTGCG CACCGACCAC ATGCAGCTCA CGCCGGCCAG CCAGGCCGCG
CCCGAAGGCC CGCACAACCA GCGCGCCGTC ATCACCGATG TCGAATACCA GGGCACCTAT
GTGCTGCTGG GGCTGCAAAA CCCCGGCATC TCCCAGTCTG TGCAGACCGC GCACACCACG
GCCGAGCTGT CGGTGATGGT GTCCGAGGCG GCGTTTGCGG CCCGGCCCTA TGCATTGGGC
GAAGCCGTCC AGTTGTCGTG GGCGCCCGAG GCCGCGCACC GCCTGCAGGC CGAGCGTTGC
GCGCCGGTCA CCGCCACGGC CTGA
|
|---|
| Protein sequence | MNAITPTIPS NQHAAPPAAI ELVALTKRYA QGSPAVDSIN LRITSGSYCC LLGPSGCGKS
TTLRMIAGHE SVSSGDILLE NRNITNLPAA QRGTAMMFQS FALFPHLSAL DNVAFSLKMK
GMGKAERHTR AKDLLDRVAM GALAERKPAE LSGGQQQRVA LARALITQPK VLLLDEPLSA
LDPFLRIQMR AELRRWQKEL GLTFIHVTHS QEEAMALADT MVVMNHGLIE QVGSPHEIYN
RPASEFVARF MGGHNVLDTP AGKIGVRTDH MQLTPASQAA PEGPHNQRAV ITDVEYQGTY
VLLGLQNPGI SQSVQTAHTT AELSVMVSEA AFAARPYALG EAVQLSWAPE AAHRLQAERC
APVTATA
|
|---|
| |