Gene Pnap_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3262 
Symbol 
ID4687628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3465901 
End bp3467301 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content63% 
IMG OID639836275 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_983481 
Protein GI121606152 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.793632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA CTGAAACCCT CGCTCTGATT GAAGCGCTCA TTGCTGAACG GCCGCAAGGC 
ATCGGAATTG CCGAGCTGGA AAAGTCGCTG GCGCAGCGCA CCGGGGCGGC TGTGCAGCGG
CGAACGCTCC AGCGGCGCCT GGAGCGCCTG CTCAAAGACC GGCGCATCAT CGCCGAAGGC
CAGAGCATTG CTTTGGTTTA CAAGCCAGCC TTGCCAGGCG CTGCTGCCAG CGTGGCAGAG
GCTCAACCCG GCGTAGAGGC AGAACTCTAC GTGCCGGTTT CCCCCGAAGG CACGGCGATT
CGGGCGCGGG TGCGCTTGCC GCTGATGCAC CGCCGCCCGG TGGGCTACCA GCGCGAATTC
CTCGAAGCTT ACCGGCCGGG CGTGACTTTT TACCTGCCCG AATCCCTGCG CGCCCAGCTC
CACGAGATGG GGCGCACGCC GGTTGGCGGC CGGCCGGCCG GCACCTATGC GCGGGACATC
ATGAACCGCC TGCTGGTGGA TCTGTCCTGG GCCTCTTCGC GCCTGGAGGG CAACACCTAC
AGCCGGCTGG ACACGCAAAA CCTGATTGAA TTCGGCCAGA TCGCCAAGGG AAAGGACGCG
CAGGAAACGC AGATGATCCT GAACCACAAG GCGGCGATTG AAATGCTGAT CGAGGACGCC
GAGCAGGTGG GCTTTGATGC TTTCACCTTC CAGAACCTGC ACGCCGTCCT GTCGCAAAAC
CTGCTGCGCG AAGAGGCTGC CTGTGGCCGC CTGCGCCGCA GGCCGGTGGA GATTTCCGGG
ACCGTGTTTC AGCCGCTGGC GATGCCGCAG GTGCTGGAAG ACTGCTTTCG GCTGCTGCTG
CAAAAGGCCG ATGCCATTCC TGATCCTTTT GAACAAGCGT TTTTCCTGAT GGTGCAGCTG
CCTTACCTGC AGCCGTTCGA GGACGTGAAC AAGCGCGTCT CGCGTATCGG CGCCAATATC
CCGCTGATCA AGCACAACCT GTGTCCCCTG TCGTTCATTG ATGTCCCGGA GCGCGCTTAC
GTGGAAGGCA CGCTGGGCGT GTATGAACTG AACCGGGTTG AACTGCTGCA GGATGTGTTC
GTCTGGGCTT ACGAGCGCTC ATGCCAGCGC TACCTGGCCA TCACGCAAAG CATGGTCGAG
CCTGACCCGC TGAAGATCAA GTACCGCGAG GCCTTGATCG AGGCGGTGCA GTCGGTGGTC
AAGGGGCTGC AGGCGCCTGA TCCGCAAACG GTAGCGCAGC TCGCTGCCAA GCTGGCGTCG
GCCGCAGACC AACAGGCGTT TGCCCAACTG CTCACCGACG CGCTCAGGCA GTTGCACGAA
GGCAGCGTGG TGCGCTGGCG GCTCAAGCGT TCGGAATTTC TGGCCTGGCA GGCGCACAGG
CCGGTTTTTC CGAAAAAATA A
 
Protein sequence
MTQTETLALI EALIAERPQG IGIAELEKSL AQRTGAAVQR RTLQRRLERL LKDRRIIAEG 
QSIALVYKPA LPGAAASVAE AQPGVEAELY VPVSPEGTAI RARVRLPLMH RRPVGYQREF
LEAYRPGVTF YLPESLRAQL HEMGRTPVGG RPAGTYARDI MNRLLVDLSW ASSRLEGNTY
SRLDTQNLIE FGQIAKGKDA QETQMILNHK AAIEMLIEDA EQVGFDAFTF QNLHAVLSQN
LLREEAACGR LRRRPVEISG TVFQPLAMPQ VLEDCFRLLL QKADAIPDPF EQAFFLMVQL
PYLQPFEDVN KRVSRIGANI PLIKHNLCPL SFIDVPERAY VEGTLGVYEL NRVELLQDVF
VWAYERSCQR YLAITQSMVE PDPLKIKYRE ALIEAVQSVV KGLQAPDPQT VAQLAAKLAS
AADQQAFAQL LTDALRQLHE GSVVRWRLKR SEFLAWQAHR PVFPKK