| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3256 |
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| Symbol | |
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| ID | 4686972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3456800 |
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| End bp | 3458056 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836269 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_983475 |
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| Protein GI | 121606146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTC CCTATGAGCT GATTTTGGGC TGGCGCTACA CCCGCGCCGG CCGCGCCACC
CGGCGCAACG GTTTTATATC CTTTATTTCC GGCGTTTCCA TGCTCGGCAT TGCGCTGGGC
GTGGCGGCGC TGATCATCGT GCTGAGCGTG ATGAACGGCT TTCAAAAGGA AGTCCGCGAC
CGTATGCTGG GCGTGATCTC GCACATCGAG GTGTTCGCGC CCGGTGGCGG CGCGCTGGCC
GATCCGCAGA AAACGCTGGC CGAGATCCGG GCCAATCCGA ATGTCGTGGG CGCTGCAACT
TTCATAGCTG CCCAGGCATT GCTGGCGCGC GGAGAGGACA TGAAAGGCAC CATGGTTCGG
GGCATTGACC CGGCGCTCGA AGGGCAGGTC ACCGACCTGG CCGTGGAACT GGAAAAAACC
TCGTTTCCCA AGCTCGTCAG CGGCCAGTTC GGCGTGGTGC TGGGCGGCGA GTTGGCGCGC
GCCATGGGCG TGCGCGAGGG CGACACCGTC ACGCTGATCG CACCCAGCGG CCAGGTCACG
CCGGCCGGCG TCGTGCCGCG CCTGAAAACC ATGACCGTGG TCGGCACCTT TGACTCGGGC
CATTTTGAAT ACGACTCGGC GCTGGTCATG ATGCACCAGG ACGACGCGGC CAAGATCTTC
CGGCTCGAAG GGCCGACCGG CATCCGCATC AAGCTCAAGG ACCTGCACCA GGCGCGGCAG
GTGGCACTGG AGCTGTCGCA GACCCTGAGC GGCGACCTGC TGATCCGCGA CTGGACGCGG
CAGAACAAGA CCTGGTTTGC CGCCGTCGAG CTGGAAAAAC GCATGATGTT CATCATCCTG
ACGCTGATCG TCGCGGTGGC GGCCTTCAAC CTGGTCAGCA CCTTGGTGAT GACGGTGACC
GACAAGCGCG CCGACATCGC CATCCTGCGC ACGCTGGGCG CCAGCCCGAA AAGCATCATG
GGCGTGTTCA TGGTGCAGGG CGCGATGGTC GGCGTGATCG GCACGCTGTC GGGCCTGCTG
CTGGGCCTTG GCATCGCCTT CAACATCGAC GTGATCGTTC CGGCGCTGGA GCGGCTGCTG
AACGCCAGCT TCTTGCCGAA AGACATCTAC CTCATCAGCC GCATGCCCAG CGAGCCGCAG
TACGCCGACA TCATGCCGAT TGTCGTGATC TCGCTGGTGC TGGCTTTCCT GGCAACCATC
TACCCGAGCT GGCGCGCCAG CCGCGTGAAC CCGGCGGAGG CCCTGCGCTA TGAATGA
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| Protein sequence | MQIPYELILG WRYTRAGRAT RRNGFISFIS GVSMLGIALG VAALIIVLSV MNGFQKEVRD
RMLGVISHIE VFAPGGGALA DPQKTLAEIR ANPNVVGAAT FIAAQALLAR GEDMKGTMVR
GIDPALEGQV TDLAVELEKT SFPKLVSGQF GVVLGGELAR AMGVREGDTV TLIAPSGQVT
PAGVVPRLKT MTVVGTFDSG HFEYDSALVM MHQDDAAKIF RLEGPTGIRI KLKDLHQARQ
VALELSQTLS GDLLIRDWTR QNKTWFAAVE LEKRMMFIIL TLIVAVAAFN LVSTLVMTVT
DKRADIAILR TLGASPKSIM GVFMVQGAMV GVIGTLSGLL LGLGIAFNID VIVPALERLL
NASFLPKDIY LISRMPSEPQ YADIMPIVVI SLVLAFLATI YPSWRASRVN PAEALRYE
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