Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3237 |
Symbol | |
ID | 4686968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3438555 |
End bp | 3440066 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836250 |
Product | hypothetical protein |
Protein accession | YP_983456 |
Protein GI | 121606127 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0768479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGT TCGAACACTT GTCGCTGGGT TTCGGCGTGG CCTTCACGCC GATCAACCTG CTGTACTGCC TGGTCGGCTG TATTCTGGGA ACGCTGATCG GCGTGCTGCC CGGCATCGGC CCGGTCGCCA CCATCGCCAT GCTGCTGCCC GCCACCTACG CGCTGCCTCC GGTGTCGGCC CTGATCATGC TGGCCGGCAT TTACTACGGA GCGCAATACG GCGGCTCGAC CACCGCTATT TTGGTGAACC TGCCCGGAGA GTCGTCCTCG GTCGTCACCT GCATTGACGG CTACCAGATG GCCAGGAAAG GGCGAGCGGG GCCGGCACTG GCTGCCGCCG GCCTGGGCTC GTTCTTCGCC GGCTGCGTTG GCACGCTGAT CCTGGCGGCG TTTGCGCCTC CGCTGACCGA ACTGGCCTTC AAGTTCGGCC CGGCCGAATA CTTTGCGCTG ATGACCCTGG GCCTGATCGG CGCCGTGGTG CTGGCTTCGG GCTCCTTGCT CAAGGCGATT GCGATGATCG TGATGGGCTT GCTGCTCGGC TTGGTCGGTA CCGACGTGAA CTCGGGCGTG GCGCGCTTCA GCTTTGACAT TCCCGAACTG ACCGACGGCA TCGGCTTCGT GGTAATTGCC ATGGGCGTGT TCGGCTACGG CGAGATCATC AGCAACCTGG CCCAGCCCGA GCATGAACGC GAAGTGTTCA CCGCCGGCGT GTCGGGCCTG TTCCCCACCA AGCAGGATTT CAAGGACATG ACGCCGGCCG TGCTGCGCGG CACTTTCCTG GGCTCTGCGC TGGGCATCCT GCCTGGCGGC GGTGCCTTGC TGGCGGCTTT TGCAGCTTAC GCGCTGGAAA AGAAAATGAA GATGAAACCG GGCGAAGTGC GATTCGGCCA GGGCAACATC CGCGGTGTGG CGGCGCCTGA GTCGGCCAAC AATGCCGGAT CGCAAACCTC GTTCATTCCG CTGCTGACGC TGGGCATTCC GCCCAACGCC GTGATGGCCC TGATGGTGGG CGCCATGACG ATTCACAACA TCCAGCCCGG CCCGCAGGTC ATGACCAGCA ACCCCGAACT GTTCTGGGGC CTGATCGCCT CGATGTGGAT CGGCAATGCG ATGCTGGTGA TTTTGAACCT GCCGCTGATC GGCATCTGGA TCAAGCTGCT GACCGTGCCT TACCGCTACC TGTTCCCGGC CATCGTGCTG TTCTGCGCCA TTGGCGTGTA CTCGACCAAC AACAACACCT GGGACGTCTG GATGGTGGGC CTGTTCGGCA TCATTGGCTA CAGCTTCGTC AAGCTGGGCT GTGAACCGGC GCCGCTGCTG CTCGGCTTCA TCCTGGGGCC AATGATGGAA GAAAACCTGC GCCGGGCGCT GCTGCTGTCG CGCGGCGACT GGAGCGTGTT CGTGACCCGT CCGCTGTCCG CCGGCCTGCT GGCTGCCGCA GTGCTGATGA TCATCATCGT GATGCTGCCT GCGGTGAAGA ACAAGCGCGA AGAAGCCTTC GTCGAAGAGT GA
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Protein sequence | MELFEHLSLG FGVAFTPINL LYCLVGCILG TLIGVLPGIG PVATIAMLLP ATYALPPVSA LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTCIDGYQM ARKGRAGPAL AAAGLGSFFA GCVGTLILAA FAPPLTELAF KFGPAEYFAL MTLGLIGAVV LASGSLLKAI AMIVMGLLLG LVGTDVNSGV ARFSFDIPEL TDGIGFVVIA MGVFGYGEII SNLAQPEHER EVFTAGVSGL FPTKQDFKDM TPAVLRGTFL GSALGILPGG GALLAAFAAY ALEKKMKMKP GEVRFGQGNI RGVAAPESAN NAGSQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG LIASMWIGNA MLVILNLPLI GIWIKLLTVP YRYLFPAIVL FCAIGVYSTN NNTWDVWMVG LFGIIGYSFV KLGCEPAPLL LGFILGPMME ENLRRALLLS RGDWSVFVTR PLSAGLLAAA VLMIIIVMLP AVKNKREEAF VEE
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