Gene Pnap_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3237 
Symbol 
ID4686968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3438555 
End bp3440066 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content63% 
IMG OID639836250 
Producthypothetical protein 
Protein accessionYP_983456 
Protein GI121606127 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0768479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGT TCGAACACTT GTCGCTGGGT TTCGGCGTGG CCTTCACGCC GATCAACCTG 
CTGTACTGCC TGGTCGGCTG TATTCTGGGA ACGCTGATCG GCGTGCTGCC CGGCATCGGC
CCGGTCGCCA CCATCGCCAT GCTGCTGCCC GCCACCTACG CGCTGCCTCC GGTGTCGGCC
CTGATCATGC TGGCCGGCAT TTACTACGGA GCGCAATACG GCGGCTCGAC CACCGCTATT
TTGGTGAACC TGCCCGGAGA GTCGTCCTCG GTCGTCACCT GCATTGACGG CTACCAGATG
GCCAGGAAAG GGCGAGCGGG GCCGGCACTG GCTGCCGCCG GCCTGGGCTC GTTCTTCGCC
GGCTGCGTTG GCACGCTGAT CCTGGCGGCG TTTGCGCCTC CGCTGACCGA ACTGGCCTTC
AAGTTCGGCC CGGCCGAATA CTTTGCGCTG ATGACCCTGG GCCTGATCGG CGCCGTGGTG
CTGGCTTCGG GCTCCTTGCT CAAGGCGATT GCGATGATCG TGATGGGCTT GCTGCTCGGC
TTGGTCGGTA CCGACGTGAA CTCGGGCGTG GCGCGCTTCA GCTTTGACAT TCCCGAACTG
ACCGACGGCA TCGGCTTCGT GGTAATTGCC ATGGGCGTGT TCGGCTACGG CGAGATCATC
AGCAACCTGG CCCAGCCCGA GCATGAACGC GAAGTGTTCA CCGCCGGCGT GTCGGGCCTG
TTCCCCACCA AGCAGGATTT CAAGGACATG ACGCCGGCCG TGCTGCGCGG CACTTTCCTG
GGCTCTGCGC TGGGCATCCT GCCTGGCGGC GGTGCCTTGC TGGCGGCTTT TGCAGCTTAC
GCGCTGGAAA AGAAAATGAA GATGAAACCG GGCGAAGTGC GATTCGGCCA GGGCAACATC
CGCGGTGTGG CGGCGCCTGA GTCGGCCAAC AATGCCGGAT CGCAAACCTC GTTCATTCCG
CTGCTGACGC TGGGCATTCC GCCCAACGCC GTGATGGCCC TGATGGTGGG CGCCATGACG
ATTCACAACA TCCAGCCCGG CCCGCAGGTC ATGACCAGCA ACCCCGAACT GTTCTGGGGC
CTGATCGCCT CGATGTGGAT CGGCAATGCG ATGCTGGTGA TTTTGAACCT GCCGCTGATC
GGCATCTGGA TCAAGCTGCT GACCGTGCCT TACCGCTACC TGTTCCCGGC CATCGTGCTG
TTCTGCGCCA TTGGCGTGTA CTCGACCAAC AACAACACCT GGGACGTCTG GATGGTGGGC
CTGTTCGGCA TCATTGGCTA CAGCTTCGTC AAGCTGGGCT GTGAACCGGC GCCGCTGCTG
CTCGGCTTCA TCCTGGGGCC AATGATGGAA GAAAACCTGC GCCGGGCGCT GCTGCTGTCG
CGCGGCGACT GGAGCGTGTT CGTGACCCGT CCGCTGTCCG CCGGCCTGCT GGCTGCCGCA
GTGCTGATGA TCATCATCGT GATGCTGCCT GCGGTGAAGA ACAAGCGCGA AGAAGCCTTC
GTCGAAGAGT GA
 
Protein sequence
MELFEHLSLG FGVAFTPINL LYCLVGCILG TLIGVLPGIG PVATIAMLLP ATYALPPVSA 
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTCIDGYQM ARKGRAGPAL AAAGLGSFFA
GCVGTLILAA FAPPLTELAF KFGPAEYFAL MTLGLIGAVV LASGSLLKAI AMIVMGLLLG
LVGTDVNSGV ARFSFDIPEL TDGIGFVVIA MGVFGYGEII SNLAQPEHER EVFTAGVSGL
FPTKQDFKDM TPAVLRGTFL GSALGILPGG GALLAAFAAY ALEKKMKMKP GEVRFGQGNI
RGVAAPESAN NAGSQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG
LIASMWIGNA MLVILNLPLI GIWIKLLTVP YRYLFPAIVL FCAIGVYSTN NNTWDVWMVG
LFGIIGYSFV KLGCEPAPLL LGFILGPMME ENLRRALLLS RGDWSVFVTR PLSAGLLAAA
VLMIIIVMLP AVKNKREEAF VEE