| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3230 |
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| Symbol | lspA |
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| ID | 4687543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3431717 |
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| End bp | 3432256 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836243 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_983449 |
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| Protein GI | 121606120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC GGACCGCCAC CAAGCCGGGC GCAAAAACAA GCTTCAAAAA AACCTCCTCC
AGCACCAGCA CGGCCATGCT GCCCTGGCTC GGGCTGGCCT TGCTTCTGCT GATGGCCGAC
CAGTTCACCA AAGTGCTGAT CCTGGGCTAC TACCGGCTGG GCGACGCGAC TTACATCACC
AGCTTTTTCA ACGTGGTCCG GGTCCACAAC ACCGGCGCGG CTTTTTCATT CCTGGCGTCG
GAATCGGGCT GGCAGCGCTG GTTTTTTACC GGCATCGGCG CGCTGGCGGC CGTGTTCATC
ATCTGGATGC TGAAGTCGCA TCCGGGGCAA AAGCTGTTTT CGCTGGCCAT GGCCTGCATC
CTGGGCGGTG CCATCGGCAA CGTCATTGAC CGCACGCTGC ACGGCTACGT GGTGGATTTT
CTGGACTTCC ACTACGGCAA CTGGCACTTT CCGGCTTTCA ACATTGCCGA CAGCGCCATC
ACCATCGGCG CCATCTGCCT GATCCTGGAT GAAGTGCTGC GGGTACGGCG CAGCCGATAG
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| Protein sequence | MATRTATKPG AKTSFKKTSS STSTAMLPWL GLALLLLMAD QFTKVLILGY YRLGDATYIT
SFFNVVRVHN TGAAFSFLAS ESGWQRWFFT GIGALAAVFI IWMLKSHPGQ KLFSLAMACI
LGGAIGNVID RTLHGYVVDF LDFHYGNWHF PAFNIADSAI TIGAICLILD EVLRVRRSR
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