| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3219 |
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| Symbol | prfC |
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| ID | 4687774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3419182 |
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| End bp | 3420798 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836232 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_983438 |
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| Protein GI | 121606109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.76683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA ACACTGAAAT CGCCAAACAA GTCAAGCGCC GCCGCACGTT TGCCATCATT
TCCCACCCCG ACGCGGGCAA GACCACGCTG ACCGAAAAGC TGCTGCTGTT CTCGGGCGCC
ATCCAGATTG CCGGCAGCGT CAAGGCGCGC AAGGCCGCGC GCCACGCGAC CTCCGACTGG
ATGGAAATCG AAAAGCAGCG CGGCATTTCC GTCGCCAGCT CGGTCATGCA GATGGAATAT
CGCGACTGCG TGATCAACCT GCTGGACACG CCCGGCCACC AGGATTTCTC CGAAGACACC
TACCGCGTGC TCACCGCCGT CGATGCCGCC TTGATGGTGA TCGACGCGGC CAACGGCGTC
GAGCCGCAAA CCCGCCGCCT GCTGCAGGTC TGCCGCGCGC GCGGCACGCC CATCCTGACC
TTCGTCAACA AGATGGACCG CGAGGTGCAG GATCCGATGA GCGTCATGGA CGAGATCGAG
CGCGAACTCG GCATGGCGGT CGTGCCCTTC ACCTGGCCGG TCGGCATGGG CAAGCTGTTC
CACGGCGTCT ATGACCGGCG CGAGGAGCGC ATGCGCGTCT TCAGCCCCGG CGAGGACAAG
GCCGGCGGCG ACGATGAAAT CCTCGCCGGC CTGGACAACG CCGAAGCGAC GAAACGCTTC
GGCGCCGAAT TCACGCAGGC GCAAGACGAA CTCGAACTGC TCGAAGGCGC GTCGCCCGAG
TTCAACCGCG AGGAATTCCT GGCCGGCCGC CAGACGCCGA TGTTCTTCGG CTCGGCGATC
AACAACTTCG GCGTGCAGGA AGTGCTCGAC GCGCTGGTCG ATCTGGCGCC CGCCCCGGCT
GACCGCCCGG CCATGCAGCG CGTCGTGCAT CCGGACGAAA AGAAATTCTC CGGCGTGGTG
TTCAAGATCC AGGCCAACAT GGACCCGGCG CACCGCGACC GGATTGCCTT TTTGCGCGTG
GCCAGCGGCG AATTCACGCG CGGCATGAAG CTCAAGGTGG TGCGCAGCGG CAAGGAAATC
CGGCCGAACA CGGTGGTCAG CTTCATGAGC CAGCGCCGCG AGCTGCTCGA CACGGCGTTT
GCCGGCGACA TCATCGGCAT CCCGAACCAC GGCGTGCTGC AACTCGGCGA CACGCTGACC
GAAGGCGAAG CGCTGCAGTT CACCGGCCTG CCCTTCTTCG CGCCGGAAAT GTTCCGCGCC
GTCGAAGTGG CCGACCCGCT GCGCAGCAAG CAGCTGCGCG CGGGCCTCAC GCAGCTCGGC
GAAGAAGGCG CGATCCAGGT GTTCCGCCCG ATTGCCGGGT CATTGCTGCT GCTGGGCGCC
GTCGGCCAGC TGCAGTTCGA GGTGGTCGCG CACCGGCTGG AGCATGAATA CGGCGTGAAG
GCGCGCATCC TGCAGAGCAA TTTCAACCTG GCGCGCTGGG TGACCTGCGA CGACGCCAAC
GAGCTGAAGA AATTCATGGA CGCCAACGCG CACCGCGTCG CGCTTGATGC CGTTGATGCG
CCGACGCTGC TGGTCGATCA CAGCGCCACG CTGCGCGCCG TCGAGCAGCA ATGGCCGAAA
ATCAAGTTCC ACGCGCTGCG TGAGCACGCC GGGCTGGTTT TTCAGGCAAA AATGTAG
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| Protein sequence | MSENTEIAKQ VKRRRTFAII SHPDAGKTTL TEKLLLFSGA IQIAGSVKAR KAARHATSDW
MEIEKQRGIS VASSVMQMEY RDCVINLLDT PGHQDFSEDT YRVLTAVDAA LMVIDAANGV
EPQTRRLLQV CRARGTPILT FVNKMDREVQ DPMSVMDEIE RELGMAVVPF TWPVGMGKLF
HGVYDRREER MRVFSPGEDK AGGDDEILAG LDNAEATKRF GAEFTQAQDE LELLEGASPE
FNREEFLAGR QTPMFFGSAI NNFGVQEVLD ALVDLAPAPA DRPAMQRVVH PDEKKFSGVV
FKIQANMDPA HRDRIAFLRV ASGEFTRGMK LKVVRSGKEI RPNTVVSFMS QRRELLDTAF
AGDIIGIPNH GVLQLGDTLT EGEALQFTGL PFFAPEMFRA VEVADPLRSK QLRAGLTQLG
EEGAIQVFRP IAGSLLLLGA VGQLQFEVVA HRLEHEYGVK ARILQSNFNL ARWVTCDDAN
ELKKFMDANA HRVALDAVDA PTLLVDHSAT LRAVEQQWPK IKFHALREHA GLVFQAKM
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