Gene Pnap_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3203 
Symbol 
ID4688782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3403056 
End bp3403988 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID639836216 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_983422 
Protein GI121606093 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.345502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTTCAA ACCTCAATCC CCTAGGCGCG CTGCCCGCGC GTTTTCGCCG CCAGCGCGTG 
CTCATCGTCG GCTGCGGCGA TGTCGGCCTG CGCGTGGCCC GCCAGCTGCC GCCCCGGCTC
AAGGTCATTG CGCTGACTTC GTCCGCCGAG CGGCTGCCGG CCTTGCGCCG GGATCGCATC
ACGCCGCTGC TGGGCAATCT GGACGATGCG GCAACGCTGC GCCGGCTGGC CGGACTGGCC
ACGCGCGTGG TGCACCTGGC GCCGCCGCCC AGCCACGACC CGAACTGGCG CGATGATCCG
CGCACGCTGG CGCTGCTGCG CGCCCTGCGC CTGCGCAGCC TGCCGCAGTC GCTGGTGTAC
GGCTCGACCA GCGGCGTGTA TGGCGATTGC GGCGGCGAGC GGGTCGATGA AACCTGGCGC
CTGAGCCCGA ACACGCCGCG TTCGCAGCGC CGGGTGCATG CCGAAGGCCA GGTGCGGCTG
TTCGGCCGCG CCAGCGCAAC GCCGGTGCAT GTGTTGCGCA TTCCCGGCAT CTATGCCACC
GACCGCGAGG GCGGCACGCC GCGCGCGCGG CTGCTCAGGG GCACGCCGGT GCTGCGCCGT
GAAGACGATG TGTACACCAG CCATATCCAT GCCGACGACC TGGCCCGGGC CTGTCTGGCC
GCCCTGTGGC GCGGCAAGCC GCAGCGCATC AGCAACGTCT GCGACGACAC GCAGTTGCTG
ATGGGCGACT ACTTTGATCT GGCGGCCGAC CTTTACCACC TGCCCCGGCC GCCCCGCGTC
GGGCGCAGCA CGGCAAACGA GCAGTTGCCG CTGATGCTGC TGAGCTTCAT GAGCGAGTCG
CGCCGGCTGG ACAACCAGCG GATGAAGAAG GAACTCGGTC TGGCGCTGCG CTATCCGACC
GTTAGCGATG GTTTGTGCGG TTTGCGAAGC TGA
 
Protein sequence
MPSNLNPLGA LPARFRRQRV LIVGCGDVGL RVARQLPPRL KVIALTSSAE RLPALRRDRI 
TPLLGNLDDA ATLRRLAGLA TRVVHLAPPP SHDPNWRDDP RTLALLRALR LRSLPQSLVY
GSTSGVYGDC GGERVDETWR LSPNTPRSQR RVHAEGQVRL FGRASATPVH VLRIPGIYAT
DREGGTPRAR LLRGTPVLRR EDDVYTSHIH ADDLARACLA ALWRGKPQRI SNVCDDTQLL
MGDYFDLAAD LYHLPRPPRV GRSTANEQLP LMLLSFMSES RRLDNQRMKK ELGLALRYPT
VSDGLCGLRS