| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3195 |
|---|
| Symbol | |
|---|
| ID | 4690142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3395231 |
|---|
| End bp | 3395674 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639836208 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_983414 |
|---|
| Protein GI | 121606085 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0952955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA TCCTGACTAT TTGCGTTGGA AACATCTGCC GCAGCCCCGT GGCTGAAGCG
CTTCTTAAAG ACCGCCTGCC CGGCCGCAAG GTTTGGTCGG CCGGTTTGCA TGCCGTGGTC
GGCCATGGCG CGGAAGCTAC CGCCCGCGAA ATAGCCGAGC AATATGGCCT GGACCTGTCC
GCCCATCGCG CCCAACAGGT TGCCGGCTGG ATGTGCAGCC ATGCCGACCT GGTGCTGGTC
ATGGAAACCA GCCATCAGCA AGAACTTCAA AAGCTTTACC CGCTGGCGCG CGGAAAAATC
CGTCGTCTGG GCGAATTCGG CCCGCAAGGC GCTTTTGAAA TTGCCGACCC TTACCGTCAG
CCTCGCGCTG CCTTCGAAGC TGCCCATGCT GCCATCGCCC AGGGCGTGGA CGAGTGGGTA
CGCCGTATCA ATCTTGTTTC GTGA
|
|---|
| Protein sequence | MNNILTICVG NICRSPVAEA LLKDRLPGRK VWSAGLHAVV GHGAEATARE IAEQYGLDLS
AHRAQQVAGW MCSHADLVLV METSHQQELQ KLYPLARGKI RRLGEFGPQG AFEIADPYRQ
PRAAFEAAHA AIAQGVDEWV RRINLVS
|
|---|
| |