| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3190 |
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| Symbol | |
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| ID | 4686384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3388472 |
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| End bp | 3389575 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639836203 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_983409 |
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| Protein GI | 121606080 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.41976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0106174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTG CATCCAACAC CACTCCCAAA GTCGCTCTCA TCACCGGCAT TACCGGCCAG
GACGGCTCTT ATCTTGCTGA GTTCTTGCTG GAAAAAGGCT ATATCGTCCA CGGCATCAAG
CGCCGCGCCT CTAGCTTCAA CACCGCCCGG GTGGACCACA TCTACCAAGA TCCACATACA
GACAACGCTA AATTCAATTT GCATTACGGT GACCTGAGCG ATTCGAGCAA CCTGACGCGC
ATTATTCAGC AGACCCAGCC CGACGAAATC TACAACCTCG GAGCCCAAAG CCATGTGGCG
GTCAGTTTTG AAAGCCCTGA ATACACCGCC GATGTGGATG GTATGGGCAC CCTGCGCATC
CTCGAAGCCA TCCGCATTCT GGGGCTGGAG AAGAAAACCC GCTTTTATCA GGCTTCTACC
TCCGAACTGT ACGGCTTGGT GCAGGAAATT CCGCAAAAGG AAACCACGCC GTTTTATCCA
CGCAGCCCGT ATGCTGTAGC CAAACTTTAC GCGTACTGGA TCACGGTGAA CTACCGCGAG
GCCTACGGCA TGTATGCCTG CAACGGCATC TTGTTCAACC ACGAAAGCCC GCGGCGCGGC
GAAACCTTTG TCACCCGCAA GATCACCCGT GGCCTAGCCA ACATCAGCAT GGGCCTGGAA
GATTGCCTGT ATATGGGCAA CATCGACGCC CTGCGCGACT GGGGCCACGC CAAGGACTAT
GTGCGCATGC AGTGGATGAT GCTGCAGCAA GACCAAGCCG AAGACTTTGT GATCGCCACC
GGCGTGCAGT ACAGCGTGCG CCAGTTCATC GAATGGAGCG CTGCCGAACT CGGCATGCAA
TTGCGCTGGG AAGGGCAGGG CGTTAACGAA GTCGGCTACT GGAACGACAA GCCCATCGTC
AAAATCGACC CGCGCTATTT CCGTCCTGCG GAAGTTGAAA CCCTGTTGGG TGACCCCACC
AAGGCCAAGG AAAAACTCGG CTGGATACCT GAAATCACCG TACAGGAAAT GTGTAAAGAA
ATGGTGGCCA ATGACTTGGC TCAGGCCAAG CAGCATGCGT TGCTCAAACA GCATGGCTAC
AGAGTCAATG TGAGCATCGA GTAA
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| Protein sequence | MTIASNTTPK VALITGITGQ DGSYLAEFLL EKGYIVHGIK RRASSFNTAR VDHIYQDPHT
DNAKFNLHYG DLSDSSNLTR IIQQTQPDEI YNLGAQSHVA VSFESPEYTA DVDGMGTLRI
LEAIRILGLE KKTRFYQAST SELYGLVQEI PQKETTPFYP RSPYAVAKLY AYWITVNYRE
AYGMYACNGI LFNHESPRRG ETFVTRKITR GLANISMGLE DCLYMGNIDA LRDWGHAKDY
VRMQWMMLQQ DQAEDFVIAT GVQYSVRQFI EWSAAELGMQ LRWEGQGVNE VGYWNDKPIV
KIDPRYFRPA EVETLLGDPT KAKEKLGWIP EITVQEMCKE MVANDLAQAK QHALLKQHGY
RVNVSIE
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