Gene Pnap_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3182 
Symbol 
ID4687436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3380274 
End bp3380831 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content50% 
IMG OID639836195 
Productputative acetyltransferase 
Protein accessionYP_983401 
Protein GI121606072 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.621032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00169424 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATTC AGGGGAATGA TCCCTACCGT GAACCGTCTT TCACGCTAAC ACACCGGCTT 
CGCCGCCAAT TATGGAACAT TGTTCAAGCG CTACTGTTTC ACACCAGCCC CCGTCCATGC
CATGTATGGC GGGCATGGTT ATTAAGGCTA TTTGGTGCCC AGATAGGCCA AGGCTGCCAT
GTATATCCGG AAGTTAAGAT CTGGGCTCCA TGGAATTTGC AACTTGGAAG CTTTGTTGGT
GTAGGCGATG GCGTAAACCT TTACTGCATG GACCGGATAG AAATAGGTGA CTACGCCGTC
ATTTCACAAG GTGCCCATTT GTGTGGGGGC ACGCATAACT ATAACAGCGT GAACTTTCAG
TTGGTGGTTA AACCTATCGT GATTGGAGCG CGCGTCTGGG TGTGTGCGGA GGCCTTCATT
CACCCCGGAG TGGTAGTGCC AGATGGTGCT GTAGTGGGTG CACGAGCCGT AGTAACAAGA
AGTCTGGTAA CGCCTTGGGC TGTGTATGCG GGAAATCCTG CAATTAAAGT AGGTAATCGA
GTAAATAACC ATGGCTAA
 
Protein sequence
MMIQGNDPYR EPSFTLTHRL RRQLWNIVQA LLFHTSPRPC HVWRAWLLRL FGAQIGQGCH 
VYPEVKIWAP WNLQLGSFVG VGDGVNLYCM DRIEIGDYAV ISQGAHLCGG THNYNSVNFQ
LVVKPIVIGA RVWVCAEAFI HPGVVVPDGA VVGARAVVTR SLVTPWAVYA GNPAIKVGNR
VNNHG