Gene Pnap_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3179 
Symbol 
ID4687410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3376984 
End bp3378072 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content45% 
IMG OID639836192 
Productacyltransferase 3 
Protein accessionYP_983398 
Protein GI121606069 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.488055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000870466 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCACTACA AGTCTATTCA GACCGGACGA GCCATTGCAG CCCTCATGGT GGTATTTTTT 
CATCTCGGCG GTACGATTGC GCTAGAGAAG TACTTTGGTA TTAGCTGGTT TGGCCATGCT
TTTTCATTCG GGCATGCTGG AGTGCATTTT TTCTTTGTAC TCAGTGGTTT TATCATCATG
CAGGTGCATA TGGACGATCT GTTCAAGCCA GAGAGAATCA GGTCTTTTTT GACTAAGCGC
TGTATTCGCA TTTATCCAAT TTATTGGCTT ATTTTTTTAG GGGTGTTTCT TTTTGCGCTA
GCGATACCTT CATTGCGAAA CAATGTGCCA TCGGATATTG GTTTGATTTT AAAAGCTCTG
ACTTTGATGC CGCTCGACAA AGCAGTGGTA GGGGGTACTG GAGCACCAGT ATTGATCGTG
GCATGGAGTC TTCAGTATGA GTTGTATTTC TATGTGCTCT TTGGTCTGGC AATCCTCAAT
CGCTGGGTTG CGATTGCACT TCTGGTTTTG CTTCCAACTG GAATGCTTTT GGGATTTGGC
GTAGGTAACT TTCCGGCCAA TTTTTTCTGG TCGGACTGGC TTGTTCTTTT CTTTTTTGGC
ATGGGAGTAG CCGTGCTTGT TCGTAGAAAC CAGATGAAAT TTTTAAACCC GATCGCTGTC
ATTGGAGTGA GTATTGCTAT TCTTGTTGCG ACGGCTTCGT TGGAGGCTTT CGGAGATGCA
GGAGAAATTA CTTGGCTTAA GATTTTTTGG GGAATTGGCT TTGCTGGTTT GATATTTGGC
TATGTACGTT GTGAGCAAGC AGGACGACGT CTTCCATTGT TGATGCGGCA TAAATCAGTT
CAAACTCTGG GCGATGCCTC TTATTTCTTG TACTTAATAC ATTTTCCGCT TATCAGTCTC
TTATGCAAAG TAGCAGTGGC GGCAGGCTTG ACAGGTATTG CCGGTGCATC AATCACTTTT
ATCTTGATTG CATTTGCCTG TGTTTTAGTT TCTTTCGCAG GACACTTGCT AATTGAGCGG
CCCATGCAAA AGTGGTTCTC GCAAACATTT ATTCCGCGGG GAGTTCTTGC GCCTGTGGCC
TCGCAATGA
 
Protein sequence
MHYKSIQTGR AIAALMVVFF HLGGTIALEK YFGISWFGHA FSFGHAGVHF FFVLSGFIIM 
QVHMDDLFKP ERIRSFLTKR CIRIYPIYWL IFLGVFLFAL AIPSLRNNVP SDIGLILKAL
TLMPLDKAVV GGTGAPVLIV AWSLQYELYF YVLFGLAILN RWVAIALLVL LPTGMLLGFG
VGNFPANFFW SDWLVLFFFG MGVAVLVRRN QMKFLNPIAV IGVSIAILVA TASLEAFGDA
GEITWLKIFW GIGFAGLIFG YVRCEQAGRR LPLLMRHKSV QTLGDASYFL YLIHFPLISL
LCKVAVAAGL TGIAGASITF ILIAFACVLV SFAGHLLIER PMQKWFSQTF IPRGVLAPVA
SQ