Gene Pnap_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3174 
Symbol 
ID4689220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3372081 
End bp3372644 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID639836187 
ProductNUDIX hydrolase 
Protein accessionYP_983393 
Protein GI121606064 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.79931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.153515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT CGATGGCCAG CGGTGCAGTC GCGGCGGATG CAGTGATTGC ACCGGAACTG 
CCCGCAAGCG AGTTTGCAGC GGCTGTAGCG GCGCTGCCGC TGGTATCGGT CGATTGGGTG
GTCACCAACC CTGACGGCCA GTTGCTGCTG GGCCAGCGTA TCAACGCCCC GGCGCGTGGC
TGGTTGTTCA CGCCGGGCGG GCGCATCCGC AAGAACGAAG CATTGGCCCA AGCCATGCTG
CGTGTGGGGC ACTGTGAACT GGGTCTGGCG CCAGACGTTT GCAGGCAGGT TCTGGGAAAA
GCCCGGCTGA TGGGCGCATG GGATCATTTC TATGCCGACA GCGCTTTCAA CGCCAGCATG
TCAACTCATT ATGTGAACCT GCCGCACTGG CTGCCGCTGA CCTGGGCCGA GGTAGCGCTT
CTCAAGCTGC CCGTGGGTGA GCAACACAGT GCCTGGCAAT GGTTGCCGCT GGGGGATGCT
GCACAGAACC CGTTGGTGCA CCCTTACGTT CGGCCCTATG CGGCCTGGGG GCTGGAAAAT
TTCTCGAATG CTATCTGTGC TTGA
 
Protein sequence
MIDSMASGAV AADAVIAPEL PASEFAAAVA ALPLVSVDWV VTNPDGQLLL GQRINAPARG 
WLFTPGGRIR KNEALAQAML RVGHCELGLA PDVCRQVLGK ARLMGAWDHF YADSAFNASM
STHYVNLPHW LPLTWAEVAL LKLPVGEQHS AWQWLPLGDA AQNPLVHPYV RPYAAWGLEN
FSNAICA