| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3169 |
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| Symbol | |
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| ID | 4687199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3365468 |
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| End bp | 3368407 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836181 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_983388 |
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| Protein GI | 121606059 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.235624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTT TCATTGCCCC CATGACTGAA GCTGCCACCC CCACACCGCC CAACCCTGCC
ACCGACACCG CCCCGGCCAT CCCTTCCACG CCGGGGCTGG ACAGCCTGGC CAAGTCGTTC
GAGCCGGCCG ACATCGAGCG CCACTGGGGT CCGCTGTGGG AGCAAAGCGG CCAGTACGAG
CCGACGCTGG ACGAATCGAA GCCGTCGTTT GCCATCCAGC TGCCGCCGCC CAACGTCACC
GGCACGCTGC ACATGGGCCA TGCGTTCAAC CAGACCATCA TGGATTCGCT GACGCGCTAC
CACCGCATGA AAGGCGACAA CACGCTGTGG GTTCCGGGCA CCGACCACGC CGGCATCGCC
ACGCAGATCG TCGTCGAGCG CAAGCTGCAG GGCGAAGAAG GCAAAACCCG CCACGACATG
GGCGCCACGC CTGCCGAAGC GCGCAAGAAT TTTGTCGCCA AGGTCTGGGA ATGGAAGGAA
GAGTCCGGCT CGACCATCAC GCGCCAGATG CGCCGCATGG GCGATTCGGT GTCGTGGAAG
CATGAATACT TCACCATGGA CCCGAAGATG TCCAAGGTGG TCACCTCGAC CTTCGTGCAG
CTCTACGAGC AGGGCCTGAT CTACCGGGGC AAGCGGCTGG TCAACTGGGA TCCGATTTTG
AAATCGGCCG TGTCCGACCT GGAAGTCGAG AGCGAGGAAG AAGACGGTTT CATGTGGCAC
ATCCGCTACC CGCTGGCCGA TGGCTCGGGC GACATCACCG TCGCCACGAC GCGCCCCGAA
ACCATGCTGG GCGACGTGGC GGTGATGGTG CATCCGGAAG ACGAGCGCTA CATGCATTTG
ATCGGCAAGG AAGTTGTCTT GCCGCTGTGC AACCGCAACA TTCCGGTGAT TGCCGACGAC
TACGTGGACA AGGAATTCGG CACCGGCGTG GTCAAGGTCA CGCCCGCGCA CGACACCAAC
GACTATGCCG TTGGCCAGCG CCACAAGCTG CCGATCATCG GCGTGCTGAC GCTCGACGCC
GCGATCAACG ACAACGCGCC CGAGAAATAC CGGGGCCTGG ACCGCTTCGT CGCCCGCAAG
GCCGTCGTGG CCGACCTGGA AGCCGCTGGC TTTCTGGTCG AAGTGAAAAA GCACAAGCTC
ATGGTGCCGC GCTGCACCCG CACCGGCCAG GTCATCGAGC CGATGCTGAC CGACCAGTGG
TTTGTCGCCG TGAACAAGGT GTCGGAGCAA GACCCTACGG CCAAGTCCAT CGCGCAAAAA
GCGATTGACG CGGTGGACAG CGGCGCGGTG AAGTTCGTTC CCGAGCAGTG GGTCAACACC
TACAACCAGT GGATGGGCAA CATCCAGGAC TGGTGCATCT CGCGCCAGCT CTGGTGGGGC
CACCAGATTC CGGCGTGGTA CGACGAGGAC GGCCAGGTCT ATGTCGCCAC CGACGAGGCC
GCCGCGCAGG CCCAGGCGCC CGGCAAAACG CTGCGCCGCG ATGAAGACGT GCTCGACACC
TGGTATTCAT CGGCGCTGGT GCCCTTCTCC TCGCTCGGCT GGCCCGAGAA GACCAAGGAA
CTGGACCTGT TTTTGCCGTC CAGCGTGCTG GTCACCGGTT ACGACATCAT CTTTTTCTGG
GTCGCCCGGA TGATCATGAT GACCACGCAC TTCACCGGCC AGGTGCCGTT CAGGCATGTC
TATATTCACG GCCTGGTGAA GGATGCGCAG GGCAAGAAGA TGAGCAAGTC CGAAGGCAAT
GTGCTCGACC CGGTCGATTT GATCGACGGC ATCGAACTCG CGCCATTGCT CGACAAGCGC
TCACAGGGCC TGCGCAAGCC TGAAACCGCG CCGCAGGTGC GCAAGAACAC CGAAAAGGAA
TTCCCCGCCG GCATTCCCGG CTACGGCGCC GATGCGCTGC GCTTTACCTT TGCGTCGCTG
GCCAGCCTGG GCCGCAGCAT CAACTTCGAC AGCAAGCGCT GCGAAGGTTA CCGCAACTTC
TGCAACAAGC TCTGGAACGC CACGCGCTTC ACGCTGATGA ACTGCGAAGG CCAGGATTGC
GGCCTCAATG AACACAGCAA GGAACAATGC GCGCCCGGCA GCGAGTTTGA AAACTATCTT
GATTTCTCGC AGGCCGACCG CTGGATTGCC TCGACCATGC AGCGCGTCGA GCTGGACGTG
GCCAAGGGCT TTGCCGAGTA CCGCCTGGAC AACGTGGCCG GCAGCATCTA CCAATTCATC
TGGGACGAGT TCTGCGACTG GTACCTGGAA ATCGCCAAGG TGCAGATCCA GCAAGGCAAC
GACGCGCAAA AACGCGCCAC GCGCCGCACG CTGATCCGCA CGCTCGAAGG CATCCTGCGG
CTGGCGCACC CCCTGATTCC GTTCATCACC GAGGAACTCT GGCAAAAGGT CGCGCCCGTG
GCCGGCAAGG CTGGCCCCTT CATCGGACTA GCCGCCTATC CGCAAAGCCA GCCCGAAAAG
ATCGACCCGC AGGCCGAAGC GCATGTCGCC AAGCTCAAGA CGCTGGTCGA TGCCTGCCGC
AACCTGCGCG GCGAAATGAA GGTCTCGCCA GCCACCCGCT TGCCATTGCT GGTCGTGGGC
GATGACGACT TCATCAACGC CGTGTCGCCA GTGCTCAAAT CGCTGGCCAA GCTCAGTGAA
GTCAAGCTGT TCGCCACCGA AGCTGAATGG GTCGCCGCCG CCGAAGCCGC ACCCGTGGCC
GTGGTCGGCG ATGCGCGCGT CTGCCTCTAC ATGGAAGTCG ATGTGGCGGC GGAAAAAGCG
CGCCTGGGCA AGGAAGCCAC GCGGCTTGAG GGCGAGCTGG TCAAGGTGCA GGCCAAGCTG
GCCAACGAGA CCTTCGTCGC CAAGGTGCCG CCCGCCGTGC TGGAGCAGGA ACGCAAGCGG
CTGACGGAAT TCACGGCGAC GCTGGAGAAA CTCAGGGAGC AGTTGGCGCG CCTGAAATAA
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| Protein sequence | MPFFIAPMTE AATPTPPNPA TDTAPAIPST PGLDSLAKSF EPADIERHWG PLWEQSGQYE
PTLDESKPSF AIQLPPPNVT GTLHMGHAFN QTIMDSLTRY HRMKGDNTLW VPGTDHAGIA
TQIVVERKLQ GEEGKTRHDM GATPAEARKN FVAKVWEWKE ESGSTITRQM RRMGDSVSWK
HEYFTMDPKM SKVVTSTFVQ LYEQGLIYRG KRLVNWDPIL KSAVSDLEVE SEEEDGFMWH
IRYPLADGSG DITVATTRPE TMLGDVAVMV HPEDERYMHL IGKEVVLPLC NRNIPVIADD
YVDKEFGTGV VKVTPAHDTN DYAVGQRHKL PIIGVLTLDA AINDNAPEKY RGLDRFVARK
AVVADLEAAG FLVEVKKHKL MVPRCTRTGQ VIEPMLTDQW FVAVNKVSEQ DPTAKSIAQK
AIDAVDSGAV KFVPEQWVNT YNQWMGNIQD WCISRQLWWG HQIPAWYDED GQVYVATDEA
AAQAQAPGKT LRRDEDVLDT WYSSALVPFS SLGWPEKTKE LDLFLPSSVL VTGYDIIFFW
VARMIMMTTH FTGQVPFRHV YIHGLVKDAQ GKKMSKSEGN VLDPVDLIDG IELAPLLDKR
SQGLRKPETA PQVRKNTEKE FPAGIPGYGA DALRFTFASL ASLGRSINFD SKRCEGYRNF
CNKLWNATRF TLMNCEGQDC GLNEHSKEQC APGSEFENYL DFSQADRWIA STMQRVELDV
AKGFAEYRLD NVAGSIYQFI WDEFCDWYLE IAKVQIQQGN DAQKRATRRT LIRTLEGILR
LAHPLIPFIT EELWQKVAPV AGKAGPFIGL AAYPQSQPEK IDPQAEAHVA KLKTLVDACR
NLRGEMKVSP ATRLPLLVVG DDDFINAVSP VLKSLAKLSE VKLFATEAEW VAAAEAAPVA
VVGDARVCLY MEVDVAAEKA RLGKEATRLE GELVKVQAKL ANETFVAKVP PAVLEQERKR
LTEFTATLEK LREQLARLK
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