Gene Pnap_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3168 
Symbol 
ID4686558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3364407 
End bp3365279 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID639836180 
Producthypothetical protein 
Protein accessionYP_983387 
Protein GI121606058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.307206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGC ATCCCAGGAA TCGCAACCTG CCTCATCTTC CACGTCGCCT GGCGATCAAA 
GCCTGCGCCT CCGGCGTGTT GCTGTGCGCT TTCGGCTTTG ACGCGCCGGC ATGGGCGCAG
CAGCCGCTGG CGCTGTCCAC GGCCATCAAC CGCGCGGGCC GCCTGCGCGC CTTGTCCCAG
CGCATCGCCA AGGCCTATGC GGAGATGGTG CTCGACGTGA TGCCCGACCG TGCGCAAAAT
GTGATGGCGA CCGCGCTGGG CATTGTCAAG ACCAACCTGA CGGAGTTGGG CCGCGCCGGA
TTTTCCGCCG ACATGGCCGG TCTGCTGAAC GTGTGCGTCG CCGACGCCGG GCGCCTGTCG
GGCCTGGTGG CCGGCGCGCC CGCAGCCGCC CGGCTCGCTG ATGTCAACAA GGCCGCCGAA
CAGCTGCTGG CCAGCGCCGA CCGCCTGACC GGGGCGCTGG AAAATCGTGG CAAGTCCAGC
GCAAAAATCG TCAATATCGC AGGCCGCCAG CGCATGCTGT CGCAAAGAAT GGCCAAGTCC
TTCATGCTGA TCGAAGCCGG CCAGGATGCG GCGCCCCTGC GCAAGCAGCT GGACACGGCG
CGCGGTGAGT TCACCGCCGG GCTGGGCGCC CTGGAAGCGG CGCCGGTTTC CACCGCTTCC
ATCAAGCAGG ATTTGCAGCA GGCGCGCACG CAATGGATGT TTTACCAAAG CGCGCTCGAT
GGCAAGGGCA GGGCCACGGC GCGCCGCGAT GTCGCCACCA CCAGCGAACG CATGCTGGAG
ATCATGGACA ACCTGACCAG CGGGTACGAC GCCGCGCTCA AGGAACTGCT GGGCAGCATG
GCCTACCCGG CCGTCCAGTA CGCGGCGCTG TAG
 
Protein sequence
MASHPRNRNL PHLPRRLAIK ACASGVLLCA FGFDAPAWAQ QPLALSTAIN RAGRLRALSQ 
RIAKAYAEMV LDVMPDRAQN VMATALGIVK TNLTELGRAG FSADMAGLLN VCVADAGRLS
GLVAGAPAAA RLADVNKAAE QLLASADRLT GALENRGKSS AKIVNIAGRQ RMLSQRMAKS
FMLIEAGQDA APLRKQLDTA RGEFTAGLGA LEAAPVSTAS IKQDLQQART QWMFYQSALD
GKGRATARRD VATTSERMLE IMDNLTSGYD AALKELLGSM AYPAVQYAAL