| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3160 |
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| Symbol | |
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| ID | 4687072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3357058 |
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| End bp | 3358227 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836172 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_983379 |
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| Protein GI | 121606050 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.350023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA TCTGGGAGCG CGTCAAAGCC GAAAGCGAAA GAAAGCATTC CGAGCGTGTG
CTGCTCCACC GGGCCATTGC ATCGAGCCAG AACGGAATCA CCATTGGACA GGCGAGCGAT
GGCGAGTTTC CCCTGGTCTA TGCCAACCCG GCGTTTTATC GCATGACCGG CTATGAGCCC
CAGGATGTGA TCGGAAACGA TTGCCGGTTT CTCCAGGGCG GCCTGACAAC GCAGCCGGGG
CTGCAGACCC TTCGCACAGC AATAGCCAAC GGCGTGGAGT CCACCGTGCT GCTGCGCAAC
TTTCGCAAGG ACGGCACCGG GTTCTGGAAC GAGTTGACGG TGTCGCCGGT GCTCAACGAC
AGCGGGACGC TGACGCACTA TGTGGGCATC CAGCACGATG TCACCGGACG CGAGAATGAC
GCCCGGGCCA TCGCCGCGCT GAATGAAGCC ATCGCCCAGC GAAGCGAAGA GCTGGAGCTG
ACCAATGAAA GCCTGCGTGC CTTCTCGGCT TCGGCCTCGC ACGACCTGCG CGCTCCGCTG
GCCTCCATCA AGGGCTTTTG CGCCATGCTG AGGAAATCAG CCGACTTGCC GCATGGCAGC
CGTTCAGCGC ATTACATGGC GCGCATCGAG GCCAACGCCG ACCGCATGGG GCAGCTCATC
GAGTCCATGC TGGAACTGGC GCAATCCACG TCAAGCATGC TCAACGTATG CAGCTGCGAC
CTTTCCATGA TGGCGCAGGA AGTGCTGGAC GCCATTCGCA CCACCTCGCC CGAACTGGAG
ACACAGGTGC ATGTCGAACC CGGCCTGGTG GCTCGGGGCG ACCCGTCGCT GGTGCATTCG
GTGCTGCAGA ACCTTCTGGG CAATGCCCTC AAATACTCCT CAAGAACACC GGGCGCCACG
GTTCACTTTG GCCGCGAGCC CGGCGAAACT GGCAAGGCCC GGTTTTTTGT GCGCGACAAC
GGTGCGGGAT TTGACATGAA AAACGCCAGC ACCCTGTTTG GCGCCTTCCA GCGCTTTCAT
TCGGAGAGCG AATTTCCCGG CACCGGGGTC GGGCTGGCCA CCGTGCACCG CATCGTGACC
CGCCATGGCG GCATGGTGTC CGCCGAGTCC GCGCCGGGCC AAGGCGCGGT TTTCTACTTC
ACGCTGGAGG CTCCTGGCGC AGCAAATTGA
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| Protein sequence | MKSIWERVKA ESERKHSERV LLHRAIASSQ NGITIGQASD GEFPLVYANP AFYRMTGYEP
QDVIGNDCRF LQGGLTTQPG LQTLRTAIAN GVESTVLLRN FRKDGTGFWN ELTVSPVLND
SGTLTHYVGI QHDVTGREND ARAIAALNEA IAQRSEELEL TNESLRAFSA SASHDLRAPL
ASIKGFCAML RKSADLPHGS RSAHYMARIE ANADRMGQLI ESMLELAQST SSMLNVCSCD
LSMMAQEVLD AIRTTSPELE TQVHVEPGLV ARGDPSLVHS VLQNLLGNAL KYSSRTPGAT
VHFGREPGET GKARFFVRDN GAGFDMKNAS TLFGAFQRFH SESEFPGTGV GLATVHRIVT
RHGGMVSAES APGQGAVFYF TLEAPGAAN
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