Gene Pnap_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3147 
Symbol 
ID4687109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3341221 
End bp3341859 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID639836159 
Productmaleylacetoacetate isomerase 
Protein accessionYP_983366 
Protein GI121606037 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT ACAACTTTTT CCGCAGCGGC ACCTCGCACC GGCTGCGCAT TGCGCTCAAC 
CTCAAAGGGC TGCAGACGCA GTACGTGGCG GTTGACCTGC GCACCGAGCA GCACCTGAAG
GACGAGTTCA AAGCCGTCAA CCCGCAGATG CTGGTGCCGG CGCTGGAGGT GCACGGCAAG
GTGCTGATCC AGTCGCCCGC CATCATCGAA TGGCTGGAAG AGACGCACCC CACACCAGCG
CTGTTGCCAG GCAACGCCGA CGACCGTGCC CATGTGCGTG CGCTGGCGGC CATCGTCGGC
TGCGACATCC ACCCGATCAA CAATCGCCGC ATTCTGGAGT ACCTGCGCAA GCAACTCGGT
GCCAGCGAAG ATGCGGTGAA CGCCTGGTGC GCCACCTGGA TCAGCGACGG GTTTGATGCC
TTCGAGGCTT TGCTGGCCGC TGACAGCCAG CGGGGCGACT TCTGCTTTGG CAACGCCCCC
ACGCTGGCCG ATGTGTATTT GGTGCCGCAG GTCGAGAGTG CGCGGCGCTT CAAGGTTGAC
ATGCAGCGCT GGCCCCGGAT GGCTGCGGTC GATGCCGCCT GCGCCAGGCT GGACGCCTTT
CGCCTGGCAG CGCCGGCGCT GCAGCCCGAC GCGGCTTGA
 
Protein sequence
MKLYNFFRSG TSHRLRIALN LKGLQTQYVA VDLRTEQHLK DEFKAVNPQM LVPALEVHGK 
VLIQSPAIIE WLEETHPTPA LLPGNADDRA HVRALAAIVG CDIHPINNRR ILEYLRKQLG
ASEDAVNAWC ATWISDGFDA FEALLAADSQ RGDFCFGNAP TLADVYLVPQ VESARRFKVD
MQRWPRMAAV DAACARLDAF RLAAPALQPD AA