Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3134 |
Symbol | |
ID | 4687134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3327333 |
End bp | 3327881 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639836146 |
Product | NusG antitermination factor |
Protein accession | YP_983353 |
Protein GI | 121606024 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTTG AAACAAACAA CGAAATCGGC GCTTCGGCCC AGGCGTTTGC CAATTCATCA TGGTATTTGA CCTACGCACG GCCCCGCCTG GAAACGGTCG CACTGCAGAA CCTGCAGCAG CAAGGTTTCG ATGCCTATCT CCCGCTTTAC AAGTCCCTGA AAAAGACCGA TGCCGGCATC AAAGCCATTT TTGTGCCGAT GTTTCCACGC TACGTATTTG TCAGGCCATC GCACCCGGCC CAGTCGATTG CACCCGTCCG CTCGACCCGG GGCGTGGCGC AGCTGGTCCA GTTTGGGAAT GAATTGGCCA CTATTCGCGC CGATGCGCTC GATGCCATCC GGCAGTTTGA GCAGCAGCGC AATGCGGCGG ATGTGGCTGA GTTGAGTTCA TTGCGCCCGG GCCATGCGGT GCGTTTTCAC AACCCGGCGC TGAGCGGGCT TGAAGGCCTG GTCAAGAGCG TTTCGAGCCT GCGCGTGACG GTGCTGCTGG AATTCATGGG TCGCGAGCAG CTGGTCAGTG TTGAGCACCA TCAATTGAAA GTCGCCTGA
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Protein sequence | MNVETNNEIG ASAQAFANSS WYLTYARPRL ETVALQNLQQ QGFDAYLPLY KSLKKTDAGI KAIFVPMFPR YVFVRPSHPA QSIAPVRSTR GVAQLVQFGN ELATIRADAL DAIRQFEQQR NAADVAELSS LRPGHAVRFH NPALSGLEGL VKSVSSLRVT VLLEFMGREQ LVSVEHHQLK VA
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