Gene Pnap_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3134 
Symbol 
ID4687134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3327333 
End bp3327881 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID639836146 
ProductNusG antitermination factor 
Protein accessionYP_983353 
Protein GI121606024 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTG AAACAAACAA CGAAATCGGC GCTTCGGCCC AGGCGTTTGC CAATTCATCA 
TGGTATTTGA CCTACGCACG GCCCCGCCTG GAAACGGTCG CACTGCAGAA CCTGCAGCAG
CAAGGTTTCG ATGCCTATCT CCCGCTTTAC AAGTCCCTGA AAAAGACCGA TGCCGGCATC
AAAGCCATTT TTGTGCCGAT GTTTCCACGC TACGTATTTG TCAGGCCATC GCACCCGGCC
CAGTCGATTG CACCCGTCCG CTCGACCCGG GGCGTGGCGC AGCTGGTCCA GTTTGGGAAT
GAATTGGCCA CTATTCGCGC CGATGCGCTC GATGCCATCC GGCAGTTTGA GCAGCAGCGC
AATGCGGCGG ATGTGGCTGA GTTGAGTTCA TTGCGCCCGG GCCATGCGGT GCGTTTTCAC
AACCCGGCGC TGAGCGGGCT TGAAGGCCTG GTCAAGAGCG TTTCGAGCCT GCGCGTGACG
GTGCTGCTGG AATTCATGGG TCGCGAGCAG CTGGTCAGTG TTGAGCACCA TCAATTGAAA
GTCGCCTGA
 
Protein sequence
MNVETNNEIG ASAQAFANSS WYLTYARPRL ETVALQNLQQ QGFDAYLPLY KSLKKTDAGI 
KAIFVPMFPR YVFVRPSHPA QSIAPVRSTR GVAQLVQFGN ELATIRADAL DAIRQFEQQR
NAADVAELSS LRPGHAVRFH NPALSGLEGL VKSVSSLRVT VLLEFMGREQ LVSVEHHQLK
VA