| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3131 |
|---|
| Symbol | |
|---|
| ID | 4686242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3322406 |
|---|
| End bp | 3323509 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639836143 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_983350 |
|---|
| Protein GI | 121606021 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGTA GTTTTAGTTT CATTTCAATG GCAGCCTGGA GCGCAGGTAG CGTGGCGTTG
CTGGTGGCCC TGTTGCTGGT GGTCTCCCAA GGCTGGCATG GCCACTACAC CATGGACTCG
ACCCACGGTG TTCAAAAGTT CCATGCCGAT CCCACCCCCC GTGTTGGCGG AATTGCCATT
GTGGCGGGCG TTGTTGCAGG CTACCTGATG ACCGACTCCG ACAAAAAATC CCTGCTCGGG
CCGCTGATCG TTGCCGGCAT TCCGGCCTTT GCATTTGGTC TGCTTGAAGA CATCACCAAG
CGCGTCAGCG TGCGCACCCG CTTTCTGGCG ACCACGGGCT GTGGCGTACT GGGCTGGGCC
ATCACCGGCT ATTCGATTAC CTACGCCAAT GTATGGGGAC TGGACTGGCT GCTCGGCTTC
ACCGCGGTTT CGGTTGCCTT TACGGCCTTT GCCGTAGGCG GCATTGCCAA CGCCATCAAC
ATCATTGACG GCTTCAACGG CCTGTCCGGT GGAACCGCTC TCATTATTCT TGCCGCTTTT
GGCTTCCTGT CCACGGCCCT GGGCGACTAT GACCTGGCCA TGACCGGCCT GATTTTGGCC
GGTGCCGTGG CCGGATTCCT GATGGTCAAC TGGCCGATGG GAAAGATATT TTTGGGTGAT
GGCGGCGCTT ACTTTGTCGG CTTTGCCATC GCCTGGCTGG CTATTTTGCT GGTGCAACGC
CATAACGAAG TGTCAGCCTG GACGCCGATG CTGATGTGCG GCTTTCCAGT GATCGAAGTG
CTGCTCAGCA TCGTGCGCCG CCACCGCCGC AACGCCAGCC TCAGTGCCCC TGACCGCCTG
CATTTGCACA GCCTGGTAAC GCGCCGCCTG GTGCGGCGCC TTTTGCCCCA GTCATCCACA
CTGGTCCGTA ATTCAGCCAC CGGCGCCCTC ATGTGGTTTG CCACCTTGCT GCCCGTCTCG
ATTGCCGTTC AGTGGCGTAC CAACACGGTC ATGCTGATGC TTGGGTTTGC AGCCTGTGCG
TTGCTGTACT CGGCCGTTTA CGCGCGGCTC ACGCAGTTCA GGTGGTGCTT CAGCCCTGCA
ACCCTGGTGC CGAAAGTGGT TTGA
|
|---|
| Protein sequence | MPGSFSFISM AAWSAGSVAL LVALLLVVSQ GWHGHYTMDS THGVQKFHAD PTPRVGGIAI
VAGVVAGYLM TDSDKKSLLG PLIVAGIPAF AFGLLEDITK RVSVRTRFLA TTGCGVLGWA
ITGYSITYAN VWGLDWLLGF TAVSVAFTAF AVGGIANAIN IIDGFNGLSG GTALIILAAF
GFLSTALGDY DLAMTGLILA GAVAGFLMVN WPMGKIFLGD GGAYFVGFAI AWLAILLVQR
HNEVSAWTPM LMCGFPVIEV LLSIVRRHRR NASLSAPDRL HLHSLVTRRL VRRLLPQSST
LVRNSATGAL MWFATLLPVS IAVQWRTNTV MLMLGFAACA LLYSAVYARL TQFRWCFSPA
TLVPKVV
|
|---|
| |