Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3105 |
Symbol | |
ID | 4687638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3288249 |
End bp | 3288908 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639836118 |
Product | two component transcriptional regulator |
Protein accession | YP_983325 |
Protein GI | 121605996 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.136173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC TGCTGGTAGA AGACGACGCC ATGATCGGCG AGGCGGTGCT GCAGGTGCTG CGCGCCGAGC ATTACGCCGT GGACTGGGTG CGCGATGGCG TCATGGCCGA CGCGGCGCTG CGCAGCGAAC AATACGACCT GGTGCTGCTC GACTTGGGCC TGCCCAAGCG CGACGGCCTG GACGTGCTGC GCGCGCTGCG CGCCCGGCGC GCGAGCGTTC CGGTGCTGGT CGCCACGGCG CGCGATGCCG TCGGCGACCG CATCGCCGGG CTCGATGCCG GCGCCGACGA CTACGTGGTC AAGCCCTACG ACATCGACGA GCTGCTGGCG CGCATTCGCG CCCTGCTGCG CCGCAGCGCC GGCCGGGGCG AGCCGGTGTT CGAGCACAAG GGTGTGAGCC TGAACCCGGC CACCCGCGAA GCCACGGTGC ACGGCCAGCC GGTGTCGCTC TCGGCGCGCG AATGGGCGGT GCTGGAGCCG CTGCTGGCCC GCCCCGGCGC GGTGCTGTCG CGCGCCCAGC TGGAAGAAAA GCTGTTCAGC TGGAAGGACG ATGTCAGCAG CAACGCGGTC GAGGTGTATA TCCACGGCGT TCGCAAAAAG CTCGGCAACG ACTTCATCCA GACCGTTCGC GGCCTGGGTT ACGTGGTGCC CAAGGAATGA
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Protein sequence | MRLLLVEDDA MIGEAVLQVL RAEHYAVDWV RDGVMADAAL RSEQYDLVLL DLGLPKRDGL DVLRALRARR ASVPVLVATA RDAVGDRIAG LDAGADDYVV KPYDIDELLA RIRALLRRSA GRGEPVFEHK GVSLNPATRE ATVHGQPVSL SAREWAVLEP LLARPGAVLS RAQLEEKLFS WKDDVSSNAV EVYIHGVRKK LGNDFIQTVR GLGYVVPKE
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