| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3104 |
|---|
| Symbol | |
|---|
| ID | 4688335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3286937 |
|---|
| End bp | 3288106 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639836117 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_983324 |
|---|
| Protein GI | 121605995 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.459276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACCA GAAAAATCCT AGCAACTGTC CGCCAAGCGC TGTCTCGCCA AGCCTCCGTG
GCCTTGATTG GCCCGCGTCA GGTGGGCAAA ACCACCTTGG CGCTCCAGAT TGGCGAGGAG
CAAAACGCGC TTTACCTTGA TCTTGAAGAC ATTCAAGAAC GAGACAAGTT GATTAACGCG
GCGGTCTTTT TGTCGGCGTA TGAAGACCGG CTTGTGATTC TGGACGAAAT TCACCGGGTG
CCCGACTTGT TTCTGACCCT GCGGGGCCTG ATTGACCAAG GCCGGCGCCG GGGGCAGCGC
ACCGGGCGCT TCCTGCTGCT CGGCTCTGCA TCGCTCGACC TGATGCGCCA AAGCGGCGAA
AGTCTGGCCG GGCGTATCAG CTACATCGAC ATGACGCCGT TAAGTGTTCT GGAGGTGCCT
GCCGAAGCGA TTGAAAATTT GTGGGTACGC GGTGGCTTTC CTGACGGTTT TCTGGCGCCA
GGCGAGCAGC AAAGCCTGAG TTGGCGCAAA GACCTGCTCA GAACTTATCT CGAACGCGAC
GTGCCCATGT TTGGCGCGCG CATTCCGGCA GAAACCTTGC GCCGGTTCTG GACCATGCTG
GCACACAACC AGGGCAGCTT GATCAACGCA TCACGCCTGG CCGCAGGCCT TGAAGTCAGC
AGCCAGACAG TGAGCCGTTA CACCGATTTG CTGGTGGATT TACTGCTGGT GCGACGCCTC
CAGCCCTACC CCGTCAACGT GGGCAAGCGC CTGGTGAAGT CGCCCAAGGT TTATATCCGT
GACAGCGGGT TGCTTCATGC ACTGCTCAAT ATTGCCGACA GGAACGCCTT GCTGGGACAC
CCGGTGGTCG GGGCAAGCTG GGAAGGCTTT GTCATTGAAA ATCTGATCAA TGCCGCGCCA
GCATTCACCG TACCGGGGTT TTACCGCACC TCCGGCGGCG CCGAAATTGA TCTGCTGCTG
GAACTGCCAG GCGGCGAGCG CTGGGCGATT GAAGTGAAAC GCAGCCGCGC CGCCAAGCCT
GCCCGAGGAT TTTATGAAGC CTGTGAAGAC CTGAAACCCG CCAGACGTTT TGTGGTTCAC
GCCGGGCTAG AGCGTTACCC CATCAGCGAA GATGTGCAAG CGATTGGGGT GCGCGAGCTG
GCTGACAACT TGTCCCGGCT GGAAATGTAG
|
|---|
| Protein sequence | MLTRKILATV RQALSRQASV ALIGPRQVGK TTLALQIGEE QNALYLDLED IQERDKLINA
AVFLSAYEDR LVILDEIHRV PDLFLTLRGL IDQGRRRGQR TGRFLLLGSA SLDLMRQSGE
SLAGRISYID MTPLSVLEVP AEAIENLWVR GGFPDGFLAP GEQQSLSWRK DLLRTYLERD
VPMFGARIPA ETLRRFWTML AHNQGSLINA SRLAAGLEVS SQTVSRYTDL LVDLLLVRRL
QPYPVNVGKR LVKSPKVYIR DSGLLHALLN IADRNALLGH PVVGASWEGF VIENLINAAP
AFTVPGFYRT SGGAEIDLLL ELPGGERWAI EVKRSRAAKP ARGFYEACED LKPARRFVVH
AGLERYPISE DVQAIGVREL ADNLSRLEM
|
|---|
| |