Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3095 |
Symbol | |
ID | 4688809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3278708 |
End bp | 3279889 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639836108 |
Product | hypothetical protein |
Protein accession | YP_983315 |
Protein GI | 121605986 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG AAATCGTGGC AAACGTGCCA CCTGCCGAGC TTGAGGAAGA AGATGTCACG GCGTTCCCGG AGCCGGAACG CCTGCTTCTT CACATGCCGG TGGATGTGCG CAATCTCTCG CTGGTCATTC TGGCGATTCT GGCCGGCCTG TTCGTGCTGC AGTGGGCGCG CGCCGTGTTC ATCCCGATCA TGCTCAGCGT GCTGTTCAGC TATGCGTTTT CGCCGCTGGT CAACTGGCTG GAGTTCAGGC GCGTGCCGCG CTGGCTGAGT TCGGCCGTAC TGCTGCTGGC CATCCTGGGC GCGATGGGCT CGGGCGCCTA CCTGCTTCGG CTGGAAGCCG CGCAACTGAT CGAGGCCTTG CCGGCTGCGG CGCAAAAGCT GGGCCGGGCG CTCAAGTCGA GCAGCGGCAA GTCCGAAAGC GCGCTGGAAA CGGTGCAAAG GGCCGCCTCC CAGATCGAGC AGGCCACCCG GGAGAGCGCT GCCGTGACCG GCCCGAACCG GGGCGCCACG CGCGTCGTGA TCGAGGCGCC GCGCTTCAAC ATCAAGGACT ATCTGTGGAC CGGCACCGTC GGCCTGCTCG CGCTGATCGG GCAGGTGACC GTGGTGGTGT TTTTGACCTA TTTTTTGATG CTCTCGGGCG ACACCTTTCG CCGCAAGCTG GTCAAGCTGG CGGGGCCGAG CCTGAGCAAG AAAAAAGTCA CGCTGCAGGC GCTGCATGAG ATTTCCGGGC AGATCCAGCG CTACCTGCAG GTGCAGTTGC TGACCAGCGC GCTGGTGGGC GTGCTGACCG GGCTGGCCCT GATGTTCCTC GGGCTGGAGA ATGCCGGGGC CTGGGGCGTG GTGGCCGGCG TGCTCAACCT GGTGCCCTAC ATCGGCTCGC TGATCACGGC GGCGGCTTCG GCGCTGGTGG CCTTCCTGCA GTTTGGCTCG ATCAACATGG CGCTGGCGGT GGGTGGCGCG TCGGTGCTGA TCCACACGCT GGTCGGCAAC CTGCTCACGC CCTGGCTGAC CAGCCGCGCC AGCCGGCTCA GTCCGGTGGC GGTGTTCATG GGGCTGCTGG CCTGGGGCTG GCTGTGGGGC GTGTGGGGCT TGCTGCTGGG CATTCCGATC CTGATGATCG TCAAGTCGGT GTGCGACCGG GTTGAGGATT TGAAGCCGAT TGGGGAGTTT CTGGGGTCGT GA
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Protein sequence | MTEEIVANVP PAELEEEDVT AFPEPERLLL HMPVDVRNLS LVILAILAGL FVLQWARAVF IPIMLSVLFS YAFSPLVNWL EFRRVPRWLS SAVLLLAILG AMGSGAYLLR LEAAQLIEAL PAAAQKLGRA LKSSSGKSES ALETVQRAAS QIEQATRESA AVTGPNRGAT RVVIEAPRFN IKDYLWTGTV GLLALIGQVT VVVFLTYFLM LSGDTFRRKL VKLAGPSLSK KKVTLQALHE ISGQIQRYLQ VQLLTSALVG VLTGLALMFL GLENAGAWGV VAGVLNLVPY IGSLITAAAS ALVAFLQFGS INMALAVGGA SVLIHTLVGN LLTPWLTSRA SRLSPVAVFM GLLAWGWLWG VWGLLLGIPI LMIVKSVCDR VEDLKPIGEF LGS
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