Gene Pnap_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3095 
Symbol 
ID4688809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3278708 
End bp3279889 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID639836108 
Producthypothetical protein 
Protein accessionYP_983315 
Protein GI121605986 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG AAATCGTGGC AAACGTGCCA CCTGCCGAGC TTGAGGAAGA AGATGTCACG 
GCGTTCCCGG AGCCGGAACG CCTGCTTCTT CACATGCCGG TGGATGTGCG CAATCTCTCG
CTGGTCATTC TGGCGATTCT GGCCGGCCTG TTCGTGCTGC AGTGGGCGCG CGCCGTGTTC
ATCCCGATCA TGCTCAGCGT GCTGTTCAGC TATGCGTTTT CGCCGCTGGT CAACTGGCTG
GAGTTCAGGC GCGTGCCGCG CTGGCTGAGT TCGGCCGTAC TGCTGCTGGC CATCCTGGGC
GCGATGGGCT CGGGCGCCTA CCTGCTTCGG CTGGAAGCCG CGCAACTGAT CGAGGCCTTG
CCGGCTGCGG CGCAAAAGCT GGGCCGGGCG CTCAAGTCGA GCAGCGGCAA GTCCGAAAGC
GCGCTGGAAA CGGTGCAAAG GGCCGCCTCC CAGATCGAGC AGGCCACCCG GGAGAGCGCT
GCCGTGACCG GCCCGAACCG GGGCGCCACG CGCGTCGTGA TCGAGGCGCC GCGCTTCAAC
ATCAAGGACT ATCTGTGGAC CGGCACCGTC GGCCTGCTCG CGCTGATCGG GCAGGTGACC
GTGGTGGTGT TTTTGACCTA TTTTTTGATG CTCTCGGGCG ACACCTTTCG CCGCAAGCTG
GTCAAGCTGG CGGGGCCGAG CCTGAGCAAG AAAAAAGTCA CGCTGCAGGC GCTGCATGAG
ATTTCCGGGC AGATCCAGCG CTACCTGCAG GTGCAGTTGC TGACCAGCGC GCTGGTGGGC
GTGCTGACCG GGCTGGCCCT GATGTTCCTC GGGCTGGAGA ATGCCGGGGC CTGGGGCGTG
GTGGCCGGCG TGCTCAACCT GGTGCCCTAC ATCGGCTCGC TGATCACGGC GGCGGCTTCG
GCGCTGGTGG CCTTCCTGCA GTTTGGCTCG ATCAACATGG CGCTGGCGGT GGGTGGCGCG
TCGGTGCTGA TCCACACGCT GGTCGGCAAC CTGCTCACGC CCTGGCTGAC CAGCCGCGCC
AGCCGGCTCA GTCCGGTGGC GGTGTTCATG GGGCTGCTGG CCTGGGGCTG GCTGTGGGGC
GTGTGGGGCT TGCTGCTGGG CATTCCGATC CTGATGATCG TCAAGTCGGT GTGCGACCGG
GTTGAGGATT TGAAGCCGAT TGGGGAGTTT CTGGGGTCGT GA
 
Protein sequence
MTEEIVANVP PAELEEEDVT AFPEPERLLL HMPVDVRNLS LVILAILAGL FVLQWARAVF 
IPIMLSVLFS YAFSPLVNWL EFRRVPRWLS SAVLLLAILG AMGSGAYLLR LEAAQLIEAL
PAAAQKLGRA LKSSSGKSES ALETVQRAAS QIEQATRESA AVTGPNRGAT RVVIEAPRFN
IKDYLWTGTV GLLALIGQVT VVVFLTYFLM LSGDTFRRKL VKLAGPSLSK KKVTLQALHE
ISGQIQRYLQ VQLLTSALVG VLTGLALMFL GLENAGAWGV VAGVLNLVPY IGSLITAAAS
ALVAFLQFGS INMALAVGGA SVLIHTLVGN LLTPWLTSRA SRLSPVAVFM GLLAWGWLWG
VWGLLLGIPI LMIVKSVCDR VEDLKPIGEF LGS