Gene Pnap_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3079 
Symbol 
ID4689386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3251028 
End bp3251582 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID639836092 
Producthypothetical protein 
Protein accessionYP_983299 
Protein GI121605970 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAT CACTTCAAGC CAGTCGGCTC AACATGCAGG CCTTTGCCCG TGAGGGCGTG 
CCGCTCATCG AAACCACTTT GCTACAAAAT ATGGAGCGCC TCGCACAGGA GGCGCGAGCG
CTAGAGCCCG ATTCGACCAT TAACTGGCAA GCCAGCGCCG AGTTGCGGCC GGGCTCGGGC
GCAGATGGCG ATGTCTGGCT ACACCTGACA GCCAAAACAT CGGTCCCGCT GACCTGCCAG
CGCTGCATGG GCACGGTTTC CACGCCGCTT GAAGTGGATC AGTGGTATCG GTTTGTCGCC
ACTGAAGACA TCGCCATGGC TGAGGACGAC GAGTCCGAGG AAGACCTGCT GGTGATGGAG
CCGCAGTTTG ACCTGCTCGC CGTGCTGGAG GACGAGTTGC TGATGGCCCT GCCGCTGGTG
CCCATGCACG ACGAATGCCC TGTCGCCCCG GTCATGCAGG TCGGTGAGGA GGCGCTGGCC
AAGGAAGCCG GCGAACAGGA CGAAAAGCCC AATCCCTTTG CATTGCTGGC GCAGTTGAAA
AAGAAAAATG GGTAG
 
Protein sequence
MSKSLQASRL NMQAFAREGV PLIETTLLQN MERLAQEARA LEPDSTINWQ ASAELRPGSG 
ADGDVWLHLT AKTSVPLTCQ RCMGTVSTPL EVDQWYRFVA TEDIAMAEDD ESEEDLLVME
PQFDLLAVLE DELLMALPLV PMHDECPVAP VMQVGEEALA KEAGEQDEKP NPFALLAQLK
KKNG