Gene Pnap_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3078 
SymbolrpmF 
ID4688670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3250623 
End bp3250805 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content55% 
IMG OID639836091 
Product50S ribosomal protein L32 
Protein accessionYP_983298 
Protein GI121605969 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0333] Ribosomal protein L32 
TIGRFAM ID[TIGR01031] ribosomal protein L32 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCC AGCAAAACAA AAAGTCCCCT TCCAAGCGCG GTATGCACCG CTCGCACAAC 
GCACTGAATG TGCCGGGTAT TGCCGTGGAG TCCACCACCG GCGAAATCCA TTTGCGCCAC
CACATCAGCC CCACCGGTTT TTACCGTGGC CGCAAAGTGC TGAAAACAAA AGCTGAAGCG
TAA
 
Protein sequence
MAVQQNKKSP SKRGMHRSHN ALNVPGIAVE STTGEIHLRH HISPTGFYRG RKVLKTKAEA