| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3073 |
|---|
| Symbol | |
|---|
| ID | 4687730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3245343 |
|---|
| End bp | 3246293 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836086 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_983293 |
|---|
| Protein GI | 121605964 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATCGT TTGCTTTTGT TTTTCCTGGC CAAGGCTCCC AGTCTGTGGG CATGCTGGAC
GCGTGGGGCG ATCACCCTGT CGTCAGGCAA ACCCTGGCGG AAGCTTCCGA CGCACTGGCT
GAGGATATCG GCCAACTCAT CAAGGACGGT CCCAAGGAAG TGCTGGCGCT GACCACCAAT
ACCCAGCCGG TGATGCTGGT GGCCGGTGTT GCTGCTTACC GGGTCTGGAT GGCTGAAACC
GGCCTTGCGC CCGCCGTGGT GGCCGGCCAC TCGCTGGGCG AATACTCGGC GCTGGTCGCA
TCAGGCGTGC TGAGCCTGGC GCAGGCCGTG CCCCTGGTCC GCTTTCGGGC GCAGGCCATG
CAGGACGCCG TGCCTGTAGG TAGGGGCGCG ATGGCTGCCA TCCTGGGCAT GGAAGCAGCC
AAGGTCATTG AAGGTTGTGC CGAAGCCGTG CGAACCTTTG GCTCCAATAC GCCTGAAATC
GTGGAAGCCG TCAATTTCAA CGACCCGATG CAAACCGTGA TTGCCGGCAG CAAGGCCGCA
GTGGACAAAG CCTGTGAAAT CCTCAAGGCC AGCGGCGCCA AACGGGCCTT GCCCTTGCCG
GTTTCAGCGC CGTTTCACTC CAGCCTGATG AAGCCGGCAG CCGACAGGCT CAAGGAGCAA
CTGGCAGGCA TCGCGTTGGC TTCCCCCCAG ATTCCTGTCA TCAACAATAT TGATGTCACC
ATCGAAAACA GCGCCGAAGG CATCCGCGCG GCGCTCTATC GCCAGGCCTT TGGCCCGGTG
CGCTGGGTCG AATGCGTGCA AGCCATCAAG GCGCTGGGCT TGACGACGCT GGTCGAGTGC
GGGCCGGGCA AGGTGCTGGC GGGTCTGGCG AAACGGATTG ATCCGGAATT GACCGGGGTG
CCCTTGTTTG ATCCGGCTTC CCTGGCTGCC GTGAAGGAGA TGCTGGCATG A
|
|---|
| Protein sequence | MKSFAFVFPG QGSQSVGMLD AWGDHPVVRQ TLAEASDALA EDIGQLIKDG PKEVLALTTN
TQPVMLVAGV AAYRVWMAET GLAPAVVAGH SLGEYSALVA SGVLSLAQAV PLVRFRAQAM
QDAVPVGRGA MAAILGMEAA KVIEGCAEAV RTFGSNTPEI VEAVNFNDPM QTVIAGSKAA
VDKACEILKA SGAKRALPLP VSAPFHSSLM KPAADRLKEQ LAGIALASPQ IPVINNIDVT
IENSAEGIRA ALYRQAFGPV RWVECVQAIK ALGLTTLVEC GPGKVLAGLA KRIDPELTGV
PLFDPASLAA VKEMLA
|
|---|
| |