| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3068 |
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| Symbol | |
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| ID | 4686161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3241659 |
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| End bp | 3242294 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639836081 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_983288 |
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| Protein GI | 121605959 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG ACCGGCCATC GCCTGCCGCC GAAAAGGCCG CCGACAGCGA CGCCATGCTG
GTGGAGCGCA CGGTCGCGGG CGACCAGAAA GCGTTTGAAC TGCTGGTCAT CAAATACCAG
CGGCGCATCC AGCGCCTGAT CGGGCGCATG GTTCGCGATG TGGACCTGGT GGAGGACATC
GCGCAGGAAA CTTTTATCCG GGCTTACCGC GCACTGTCCC AGTTCAGGGG AGAGGCCCAG
TTCTACACCT GGCTTTACCG GATAGCGGTC AACACCGCCA AAAAAGCCCT GATGGACCTG
AAGCGAAATC CCACGGTTTC GGAAAATGCC TACAAATCCG ACGACGACGA TGAAACTTCC
CGGGTCGAGA ACGAACTAAC CACTTCAGAA ACCCCCGAAG CGGTGCTGGC CAGCAAGGAA
ATTGCGGCCA TCATCAACAC AGCCATGCAG GAGTTGCCCG AAGAATTGCG CGAAGCGATC
ACCTTGCGGG AAATAGAAGG CTTGAGTTAT GAGGATATAT CCGAAGCCAT GAATTGCCCC
ATCGGTACGG TACGGTCCCG GATTTTCAGA GCCCGTGAAG CGATTTCCGC CAAGGTCAAG
CCCTTGCTGG AAAACCAGAC CGGCAAACGC TGGTAG
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| Protein sequence | MSDDRPSPAA EKAADSDAML VERTVAGDQK AFELLVIKYQ RRIQRLIGRM VRDVDLVEDI
AQETFIRAYR ALSQFRGEAQ FYTWLYRIAV NTAKKALMDL KRNPTVSENA YKSDDDDETS
RVENELTTSE TPEAVLASKE IAAIINTAMQ ELPEELREAI TLREIEGLSY EDISEAMNCP
IGTVRSRIFR AREAISAKVK PLLENQTGKR W
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