| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3066 |
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| Symbol | |
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| ID | 4686385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3239890 |
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| End bp | 3240933 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836079 |
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| Product | putative sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_983286 |
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| Protein GI | 121605957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGGAA GTTCTTTCAA AACCATGATT TTTAAGTGTT TTAGGCCTTT TGCGCTTGTC
CTGTATGCGT GTACAGCTAT AAATTATGTA GCAGCACAAG TGCCGTCGAT TTCGATACCG
CCCGTCGCGG CTGCATCGGT TTCTGACCCG CGCAGCCTCA ATGACTGGTT GCTGCGCATG
CATCAGGCCT CCAGCCAACG CTCCTACGTG GGAACCTTCG TGGTGTCGGC GGGCGGCAAC
ATGTCCAGCG CCAAGATATG GCATGTCTGC GAAGGCAAAC AGCAGGTGGA GCGGGTCGAA
ACCCTGACCG GCGCGCAGCG TTCGATCTTC AGGCACAACA ACCAGGTGAT CACCTTCATG
CCGGAGCACA AGGTGGCGCG CAGTGAAAAA CGCGAATCCC TGGGCCTGTT CCCCGAAATG
TTCCAGTCGG CCGACAGCCG CATTGCCGAC TTCTACCAGT TCCGGCGGGA GGGCATCGAG
CGGGTGGCTG GCGTTGACGC CGACATCATC ACGCTCATGC CCAGGGACAG TCTGCGCTTT
GGCTACCGCG TCTGGAGCGA GCGCCAGAAC GGCCTGGTCG TGAAGCTCCA GACGCTTGAT
ACCGATGGCA AGGTGATTGA ACAGGCGGCG TTTTCAGAAC TGCAGCTCGA CGCGCCGGTC
AGCATGAACC AGCTCATCCA GATGATGGGC AAGGTGGAAG GCTACCGGCT TGAAAAACCA
GTGCTGGTCA AGACAACGGC AAGCGCTGAA GGCTGGGCCT TGAGGGCGCC CGTGGCCGGT
TTCACTGCCA TGAATTGCTA CAAGCGGCCC GCTTCTTCGG CCGGCGAAGG GCCGCTGCAG
TGGATTTTTT CAGATGGCCT GGCGTCGGTG TCCATTTTTG TGGAGCCGTT CGACCGGCAG
CGCCATGTCC GGGAATCCAG TCTTTCCCTG GGCGCGACCC AGACCCTGAC CCGGCAGCTT
GATGCGTACT GGATTACGCT GGTGGGTGAA GTCCCTGCCG CAACCTTGCA GCTTTTTGCC
AGCGGGCTGG AGCGAAAAAA ATAA
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| Protein sequence | MRGSSFKTMI FKCFRPFALV LYACTAINYV AAQVPSISIP PVAAASVSDP RSLNDWLLRM
HQASSQRSYV GTFVVSAGGN MSSAKIWHVC EGKQQVERVE TLTGAQRSIF RHNNQVITFM
PEHKVARSEK RESLGLFPEM FQSADSRIAD FYQFRREGIE RVAGVDADII TLMPRDSLRF
GYRVWSERQN GLVVKLQTLD TDGKVIEQAA FSELQLDAPV SMNQLIQMMG KVEGYRLEKP
VLVKTTASAE GWALRAPVAG FTAMNCYKRP ASSAGEGPLQ WIFSDGLASV SIFVEPFDRQ
RHVRESSLSL GATQTLTRQL DAYWITLVGE VPAATLQLFA SGLERKK
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