| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3064 |
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| Symbol | |
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| ID | 4687604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3236140 |
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| End bp | 3237951 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639836077 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_983284 |
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| Protein GI | 121605955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.128095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA TTCGAAATTT TTCGATCATT GCGCACATTG ATCATGGCAA GTCCACGCTT
GCAGACCGGC TGATCCAGCG CTGCGGCGGC CTGCAGGACC GGGAAATGAG TGCGCAGGTG
CTCGATTCGA TGGACATCGA AAAAGAGCGC GGCATCACCA TCAAGGCGCA GACCGCTTCG
CTGAAATACA AGGCCCTTGA CGGCCAGGTT TACAACCTGA ACCTGATTGA CACGCCCGGC
CATGTTGACT TCTCTTACGA AGTCAGCCGT TCGCTGTCGG CCTGCGAGGG CGCGCTGCTG
GTGGTTGATG CCAGCCAGGG TGTCGAGGCG CAAACCGTGG CCAATTGCTA CACCGCGCTG
GACCTGGGCG TGACGGTTGT GCCGGTGCTC AACAAGATGG ATTTGCCGCA GGCCGACCCC
GACAACGCCA AACAGGAAAT TGAAGAGGTC ATCGGCATTG ACGCTACCGA TGCGATTCCC
TGCAGCGCCA AGACCGGCAT GGGCATCGAC GAGATTCTCG AAGCCGTCGT CGCCCTGATT
CCCGCGCCCA AGGGCAATCC CGACGCCGCC TTGCGCGCCA TGATCATCGA CAGCTGGTAC
GACGCTTATG TGGGCGTGGT CATGCTGGTG CGCGTGGTCG ATGGCCGTCT GGCCAAGGGC
GACCGCATCA AGCTGATGGC CAGCGAAGCG ACCTACAACG CCGAGCAGCT GGGTGTCTTC
ACGCCGCACA CCGAGGCGCG CCAGGCGCTT GAAGCCGGCG AGGTCGGCTT TGTGATTGCC
GGCATCAAGG AACTCCAGGC GGCCCGCGTC GGCGACACCG TCACCCTGAT CAAGGGCGGC
ACGGGCGGCG CGGCCTTCAC CGCCACCGAG GCCTTGCCGG GTTTCAAGGA AATCCAGCCC
CAGGTATTTG CCGGCCTGTA TCCCTCGGAA GCCAGCGAAT ACGAGTCCCT GCGCGATGCG
CTGGAAAAGC TCAAGCTCAA TGATGCGTCG CTGCATTACG AGCCCGAGGT CAGCGAGGCG
CTGGGTTTTG GCTTTCGCTG CGGCTTTCTG GGCCTGCTGC ACATGGAAAT TGTCCAGGAG
CGGCTGGAGC GCGAATTCGA CCAGGACCTG ATCACGACCG CGCCCAGCGT GGTGTACGAA
GTGCTCAAGG CCGATGGCAC AACCATCAAG GTCGAGAACC CGTCGAAGAT TCCGGATGCC
GGGCGCGTCA ACGAGATTCG CGAGCCCATC GTGACCGTTC ATCTCTACAT GCCGCAGGAC
TATGTCGGCG CCGTCATGAC GCTGGCCAAC CAGAAGCGCG GCGTGCAGCT GAACATGGCC
TACCACGGCA AGCAGGTCAT GCTGACCTAT GAAATGCCGC TGGGCGAGAT CGTTCTGGAC
TTCTTCGACA AGCTCAAGTC GGTATCGCGC GGCTATGCGT CGATGGACTA CGAGTTCAAG
GAGTTCCGCG CTTCCGACGT GGTCAAGGTC GATATCTTGC TCAACGGCGA AAAGGTCGAT
GCGCTGTCCA TCATCGTTCA CCGCAGCCAG TCGGCCTACC GCGGCCGGGC AGTGGTCGCC
AAGATGCGCG AGATCATTTC GCGCCAGCAG TTCGACGTGG CGATCCAGGC GGCCATCGGG
GCCAACATTA TTGCCCGTGA GACAATCAAG GCTTTGCGTA AAAACGTGAT TGCCAAGTGC
TACGGCGGCG ATATTTCCCG CAAGAAGAAG CTGCTTGAAA AGCAAAAGGC GGGCAAGAAA
CGTATGAAAC AAATCGGTTC AGTCGAGGTG CCGCAAGAGG CATTCCTCGC CATCTTGCAG
GTGGAAGACT GA
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| Protein sequence | MNHIRNFSII AHIDHGKSTL ADRLIQRCGG LQDREMSAQV LDSMDIEKER GITIKAQTAS
LKYKALDGQV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAL
DLGVTVVPVL NKMDLPQADP DNAKQEIEEV IGIDATDAIP CSAKTGMGID EILEAVVALI
PAPKGNPDAA LRAMIIDSWY DAYVGVVMLV RVVDGRLAKG DRIKLMASEA TYNAEQLGVF
TPHTEARQAL EAGEVGFVIA GIKELQAARV GDTVTLIKGG TGGAAFTATE ALPGFKEIQP
QVFAGLYPSE ASEYESLRDA LEKLKLNDAS LHYEPEVSEA LGFGFRCGFL GLLHMEIVQE
RLEREFDQDL ITTAPSVVYE VLKADGTTIK VENPSKIPDA GRVNEIREPI VTVHLYMPQD
YVGAVMTLAN QKRGVQLNMA YHGKQVMLTY EMPLGEIVLD FFDKLKSVSR GYASMDYEFK
EFRASDVVKV DILLNGEKVD ALSIIVHRSQ SAYRGRAVVA KMREIISRQQ FDVAIQAAIG
ANIIARETIK ALRKNVIAKC YGGDISRKKK LLEKQKAGKK RMKQIGSVEV PQEAFLAILQ
VED
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