| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3055 |
|---|
| Symbol | |
|---|
| ID | 4686846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3229220 |
|---|
| End bp | 3229729 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639836068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983275 |
|---|
| Protein GI | 121605946 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACC TTGCCGCCTA TCCAGAAAGC CTCCAAACGC AGGTGCAGCA GTTGCTGGCG
CAGGGCCGGC TGGGGGATAG CCTGCTTGCC AAATACAGGC ATGCGCACAC GGTGAAAACC
GACAAGGCCC TGTACGACTA TGTGATGGTG CTGAAGAATG ATTTCTTGCG CAATTCCGAA
CCGCTGTCGA AAGTGATGTT TGACAGCAAG CTGCAGATCA TCACGCATGC ACTCGGCACA
CACACCACCA TTTCACGCGT GCAGGGCAAC AAGCTCAAGT CCAAGCGCGA AATCCGCGTG
GCGTCGCTGT TCAAGGACGT GCCGGTGGAA TTTTTGCGGA TGATTGCCGT GCATGAGCTG
GCGCACATCA AGGAAAAAGC GCACGACAAG GCGTTTTACC AACTCTGCAC CTACATGGAG
CCGCAGTACC ACCAGTACGA GTTTGACCTG CGCGTGTACC TGACGCATAT CGACGCGGCG
GGCAAGCTGG AGTGGCCGGC GCTGGCCTGA
|
|---|
| Protein sequence | MKYLAAYPES LQTQVQQLLA QGRLGDSLLA KYRHAHTVKT DKALYDYVMV LKNDFLRNSE
PLSKVMFDSK LQIITHALGT HTTISRVQGN KLKSKREIRV ASLFKDVPVE FLRMIAVHEL
AHIKEKAHDK AFYQLCTYME PQYHQYEFDL RVYLTHIDAA GKLEWPALA
|
|---|
| |