| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3047 |
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| Symbol | trpA |
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| ID | 4688339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3220270 |
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| End bp | 3221088 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836060 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_983267 |
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| Protein GI | 121605938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TTGAATCGAC TTTCTCCAGC CTTAAAACCC AGGGTCGCAA GGCCTTGATC
CCCTACGTCA CGGCGGGCTT TCCGTTTGCC GATGTCACGC CCGAACTGAT GCACGGCATG
GTGGCCGGCG GCGCTGACGT GATTGAACTG GGCATGCCGT TTTCCGACCC CAGCGCCGAT
GGCCCGGTGA TCCAGAAGGC CGGAGAAAAA GCGCTTTCCT TCGGCATCGG CCTGGTTCAG
GTGCTTGAAA TGGTGCGCAT TTTCCGCACA AAAGACCACA CGACGCCAGT CGTGCTCATG
GGCTACGCCA ACCCAGTCGA GCGCTACGAC ATCAAGCATG GCGCAGGCGC CTCCGAAAGC
GCCTTTATCC GCGATGCCGC CGCCGCCGGT GTCGATGGCA TGCTGATCGT TGACTATCCG
CCAGAAGAGT GCGTGGAATT TTCCGCCAGA CTCAAGGCGC ACGGCATGGA CCTGATCTTT
TTGCTGGCAC CCACCAGCAC CGACGCACGC ATGGCCCAGG TCGCCCAGGT CGCCAGCGGC
TATGTGTATT ACGTGTCGCT CAAGGGCGTG ACCGGCGCCG GCACGCTGGA CGTGGATGCG
GTCGAAGCCA TGCTGCCGCG CATTCGCCGG CATGTGAACG TGCCTGTCGG CGTGGGCTTT
GGCATTCGCG ACGCCGCGAC CGCAAAGGCC ATAGGCAAAG TGGCTGATGC CGTGGTCATT
GGCAGCAAGA TCATCCAGCT GATTGAAAAC CAGCCGCGCG ACCGGGTTGC CGCCGTGGCG
CATGACTTTT TGAAGGAAAT CCGCTCGGCG CTGGACTGA
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| Protein sequence | MSRIESTFSS LKTQGRKALI PYVTAGFPFA DVTPELMHGM VAGGADVIEL GMPFSDPSAD
GPVIQKAGEK ALSFGIGLVQ VLEMVRIFRT KDHTTPVVLM GYANPVERYD IKHGAGASES
AFIRDAAAAG VDGMLIVDYP PEECVEFSAR LKAHGMDLIF LLAPTSTDAR MAQVAQVASG
YVYYVSLKGV TGAGTLDVDA VEAMLPRIRR HVNVPVGVGF GIRDAATAKA IGKVADAVVI
GSKIIQLIEN QPRDRVAAVA HDFLKEIRSA LD
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