| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3044 |
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| Symbol | truA |
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| ID | 4688232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3217475 |
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| End bp | 3218269 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836057 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_983264 |
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| Protein GI | 121605935 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGATTG CGCTGGGTAT CAGCTACAGC GGCAGCGCTT ACGAAGGCTG GCAAAGCCAG
CTTTCGGGCA AGACGGTGCA GGACAAACTG GAACTGGCCT TGAGCAGGTT TGCCGTCCAG
CCCATTCGCG TCATGTGTGC CGGACGCACC GATGCCGGCG TTCATGCGCT GATGCAGGTG
GTCCACTTCG ACACCCCGTT GCAGCGTGAA ACCTCGTCCT GGGTGCGCGG CACCAACGCT
TTTTTGCCTT CCGACATTGC AGTGCAGTGG GCGCAACCGG TTCCCGATGA ATTTCACTCG
CGCGCCAGCG CCATCGCGCG CCGTTACGCC TATGTGGTAC TGGAGTCGCC GGTGCGCCCC
AGTGTCGAAG CCGGGCGCGT CGGCTGGGTC TATCGCCCGC TTGATGGCGA TGCGATGCGG
CAAGCCGCCC TGCACCTGAT GGGCGAGCAC GATTTCAGTT CGTTTCGGGC CGCGCAGTGC
CAGGCCAAAT CACCCGTCAA AACCATGAGC CGTATCGAGA TTTCCCAGCG CGCCGGACCC
GGTTCACGCT ATTGGCGCTT CGAATTTGAA GCCAACGCTT TCTTGCACCA CATGATCCGC
AATATCATGG GCTGCCTGCT GGCGATAGGC CAGGGCAACC ATCCGCCCGA ATGGCTGGCC
GAGGTAGTCG CCGCCCGTCG CCGCGATGCC GCCGCACCCA CCTTCTCGCC TGACGGGCTT
TATTTTCTGG GTCCGGTGTA TGAAGAACGC CATGGCTTGC CATCGCGCAC GGCGGCTTAT
GATTGGCTGC CATGA
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| Protein sequence | MRIALGISYS GSAYEGWQSQ LSGKTVQDKL ELALSRFAVQ PIRVMCAGRT DAGVHALMQV
VHFDTPLQRE TSSWVRGTNA FLPSDIAVQW AQPVPDEFHS RASAIARRYA YVVLESPVRP
SVEAGRVGWV YRPLDGDAMR QAALHLMGEH DFSSFRAAQC QAKSPVKTMS RIEISQRAGP
GSRYWRFEFE ANAFLHHMIR NIMGCLLAIG QGNHPPEWLA EVVAARRRDA AAPTFSPDGL
YFLGPVYEER HGLPSRTAAY DWLP
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