| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3039 |
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| Symbol | |
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| ID | 4688815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3209909 |
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| End bp | 3211360 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836052 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_983259 |
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| Protein GI | 121605930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCA CCCTCTACGA CAAAATCTGG GACGAGCACG TCGTTCATAC CGAAGAAGAC
GGCACCTCGA TCCTGTACAT CGACCGCCAT CTGGTCCATG AAGTCACCAG CCCGCAGGCC
TTTGAAGGCC TGCGCGAAGC CGGCCGCAAG GTCTGGCGCA TCAGTTCCAT CGTCGCGACC
GCCGACCACA ACACGCCCAC GACCGGCTGG GAACTGGGTT ACGACGGCAT CACCGACCTG
GTCAGCAAGG AGCAGATCAC CACGCTGGAC GCCAACATCA AGGAATTCGG CGCCGCTGCC
TTCTTCCCCT TCATGTCCAA ACGCCAGGGC ATCGTGCATG TGATCGGCCC TGAAAACGGC
GCCACGCTGC CCGGCATGAC CGTCGTTTGC GGCGACTCGC ACACCTCGAC CCACGGCGCG
TTTGGCGCGT TGGCGCACGG CATCGGCACC AGCGAGGTCG AACACGTCAT GGCCACGCAA
ACCCTGCTGG CCAAAAAAGC CAAAAACATG CTCATCAAGG TCGAAGGCGC CGTGACCAAA
GGCGTGACCG CCAAGGACAT CGTGCTGGCC ATCATCGGCA AGATTGGCAC GGCGGGCGGC
ACCGGCTACA CGATTGAATT TGCCGGCTCG GCGATTCGCG CACTCAGCAT GGAAGGCCGC
ATGACGGTCT GCAACATGGC GATTGAAGGC GGCGCGCGCG CCGGCCTGGT GGCCGTCGAT
GCCAAGACCA TCGAGTACCT CAAGGGCCGC CTGCTGGCTC CCGGAACCGA CTCCGTCACC
GGCAAGTTCG TCGGCGGCCC CGAATGGGAC ATGGCCGCGC GCTACTGGGC CACGCTGCAC
TCCGACGCCG ACGCCACCTT TGACGCCGTG GTCGAGCTGG ACGCCAGCCA GATCCTGCCG
CAGGTCAGCT GGGGCACTTC GCCCGAGATG GTGCTGTCGA TTGAAGACCG CGTACCCGAC
CCGGAAAAGG AAAAGGACGC CAACAAGCGC GGCGCCATCG AACGCGCCCT GACCTACATG
GGCCTGGAGC CGGGCAAGGC GCTGAATGAC CTGTACATCG ACAAGGTGTT CATCGGTTCG
TGCACCAACA GCCGCATCGA AGACATGCGC GAAGCGGCTG CCGTGGTGAA GCATATCGGC
CAGAAGGTCG CCAAAAATGT CAAGCTGGCA ATGGTCGTGC CGGGCTCTGG CCTGGTCAAG
GAGCAGGCCG AGCGCGAAGG CCTGGACAAG ATCTTCATCG CCGCCGGCTT TGAATGGCGC
GAGCCCGGCT GCTCGATGTG CCTGGCGATG AATGCCGACC GGCTGGAGCC GGGCGAGCGC
TGCGCCTCCA CCAGCAACCG CAACTTTGAA GGCCGCCAGG GTGCGGGCGG GCGCACCCAC
CTGGTCAGCC CGGCCATGGC GGCGGCGGCG GCGGTGCATG GCCACTTTGT CGATATCCGT
AAATTTGTCT GA
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| Protein sequence | MGRTLYDKIW DEHVVHTEED GTSILYIDRH LVHEVTSPQA FEGLREAGRK VWRISSIVAT
ADHNTPTTGW ELGYDGITDL VSKEQITTLD ANIKEFGAAA FFPFMSKRQG IVHVIGPENG
ATLPGMTVVC GDSHTSTHGA FGALAHGIGT SEVEHVMATQ TLLAKKAKNM LIKVEGAVTK
GVTAKDIVLA IIGKIGTAGG TGYTIEFAGS AIRALSMEGR MTVCNMAIEG GARAGLVAVD
AKTIEYLKGR LLAPGTDSVT GKFVGGPEWD MAARYWATLH SDADATFDAV VELDASQILP
QVSWGTSPEM VLSIEDRVPD PEKEKDANKR GAIERALTYM GLEPGKALND LYIDKVFIGS
CTNSRIEDMR EAAAVVKHIG QKVAKNVKLA MVVPGSGLVK EQAEREGLDK IFIAAGFEWR
EPGCSMCLAM NADRLEPGER CASTSNRNFE GRQGAGGRTH LVSPAMAAAA AVHGHFVDIR
KFV
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