Gene Pnap_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3035 
Symbol 
ID4689361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3206303 
End bp3207007 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID639836048 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_983255 
Protein GI121605926 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GTACTTTCCA GATTTACCGT TACGACCCAG ATACCGATGC CAAGCCCTAC 
ATGCAGACCA TCGAGGTGGA ACTCGACGGC CATGAGCGCA TGCTGCTCGA CGCGCTGATG
AAACTCAAGG CGCAAGACCC CACCATCAGT TTTCGCCGCT CATGCCGCGA AGGCGTGTGC
GGATCGGACG CCATGAACAT CAATGGCAAG AATGGCCTGG CCTGCCTGAC CAACATGAAC
ACGCTCAAGG GCACCATCGT GCTGAAGCCG CTGCCCGGCC TTCCAGTGGT GCGCGACCTG
TTTGTTGACA TGACGCAGTT CTTCAAGCAG TACAACTCGA TCAAGCCCTA CCTGATCAAC
AACAACGTGC CGCCCCAGAC GGAGCGTCTG CAAAGCCCGG AAGAGCGCGA TGAACTCAAC
GGCCTGTACG AGTGCATCCT GTGCGCGAGC TGCTCCACGT CCTGCCCCAG CTTCTGGTGG
AATCCCGACA AGTTCGTGGG CCCGGCCGGT TTGCTGCAGG CCTACCGCTT CCTGGCAGAC
AGCCGCGACG AAGCGACCGC AGAGCGGCTG GACAATCTGG AAGACCCGTA CCGCCTGTTC
CGTTGCCACA CCATCATGAA CTGCGTCGAT GTCTGCCCCA AAGGACTGAA CCCGGCCAAG
GCCATCGGCA AGATCAAGGA AATGATGGTT TTGCGCACCG TCTGA
 
Protein sequence
MTKRTFQIYR YDPDTDAKPY MQTIEVELDG HERMLLDALM KLKAQDPTIS FRRSCREGVC 
GSDAMNINGK NGLACLTNMN TLKGTIVLKP LPGLPVVRDL FVDMTQFFKQ YNSIKPYLIN
NNVPPQTERL QSPEERDELN GLYECILCAS CSTSCPSFWW NPDKFVGPAG LLQAYRFLAD
SRDEATAERL DNLEDPYRLF RCHTIMNCVD VCPKGLNPAK AIGKIKEMMV LRTV