Gene Pnap_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3032 
Symbol 
ID4689307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3203516 
End bp3203962 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID639836045 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_983252 
Protein GI121605923 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.819234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC TGGCCTCCAC TCAGCGCGCC AAGCGGCCTG AGTTCCGCAA CATCAACGCC 
TTCACCGACC TGCCCGGCTA CCGATTACCC CTGGCGGGCC TGGTGTCCAT CCTTCACCGC
ATCAGCGGGT TCATCATGTT CCTCCTGATG CCGTTCATCA TCTGGATGTT CGACACCTCG
ATTTCCTCCG AAATTTCCTT TGACCGATTC AAGGCTGCCT TCAACGTGGG CATGCTGGGT
GTGCCAGGCA TCCTCTGGAA ACTGGTCGCG CTGGCCCTGA TCTGGGCTTA CCTGCACCAT
TTCCTGGCAG GCCTTCGCCA CCTGTGGATG GATGCCAGCC ATGAAGCCGT CAGCAAGGAT
TTCGGCCGGC AGTCAGCCGC CTTCACGCTG GCCGTGAGCA TTGGCCTCAC GATTGCGCTG
GGTGCCAAGC TGTTTGGCCT TTATTAA
 
Protein sequence
MTELASTQRA KRPEFRNINA FTDLPGYRLP LAGLVSILHR ISGFIMFLLM PFIIWMFDTS 
ISSEISFDRF KAAFNVGMLG VPGILWKLVA LALIWAYLHH FLAGLRHLWM DASHEAVSKD
FGRQSAAFTL AVSIGLTIAL GAKLFGLY