| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3030 |
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| Symbol | |
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| ID | 4689791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3201325 |
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| End bp | 3202311 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836043 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_983250 |
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| Protein GI | 121605921 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.392331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.928873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AACCCGTCCG TGTTGCAGTT ACTGGTGCCG CCGGTCAAAT TGGTTATGCA
TTGCTGTTTC GCATTGCCTC GGGCGAAATG CTCGGCAAAG ACCAGCCTGT CATTTTGCAA
TTGCTTGAAG TTCCGGTCGA AGGCCCGCAA AAAGCGCTCA AGGGCGTGAT GATGGAACTC
GACGACTGCG CTTTCCCGCT GCTGGTGGAA ATGACCGCGC ACAGCGACCC GATGACGGCT
TTCAAGGACG CCGACTACGC GCTGCTGGTC GGTTCGCGTC CACGTGGCCC CGGCATGGAA
CGTGCCGAAC TGCTGGCCGT CAACGGCGCG ATTTTCACGG CACAAGGCAA GGCATTGAAC
GCCGTCGCCA GCCGCGACGT GCGCGTTCTG GTCGTCGGCA ACCCGGCCAA CACCAACGCC
TACATCGCCA TGAAGAGCGC GCCTGACCTG CCAGCGAAAA ACTTCACCGC CATGCTGCGC
CTGGACCACA ACCGCGCTGC TTCGCAAATC GCTGCCAAGA CCGGCAAGGC CGTGGCCGAC
ATCGAAAAAC TCACCGTCTG GGGCAACCAC TCGCCCACGA TGTACGCCGA CTACCGTTTC
GCCACCATCG GCGGCGAGAG CGTGGCCCAG ATGATCAACG ACCAGGAATG GAACGCCAAC
GTGTTCCTGC CAACCGTCGG CAAGCGCGGC GCGGCCATCA TCGAAGCGCG CGGTTCTTCT
TCGGCCGCAT CGGCAGCCAA CGCCGCCATC GACCACATGC GCGACTGGGC GCTGGGCACT
AACGGCAAGT GGGTCACGAT GGGCATCCCA TCGGGCGGCG AGTACGGCAT TCCTGCTGAA
ACGATGTTCG GCTTCCCAGT GACCTGCGAA AACGGCGAAT ACAAGATCGT CGAAGGCCTG
GAAATCGACG CTTTCTCGCA AGAGCGCATC AACATCACCC TGGCTGAGCT GGAAGGCGAA
AAAGCCGGCG TCGCTCACCT GCTGTAA
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| Protein sequence | MSKKPVRVAV TGAAGQIGYA LLFRIASGEM LGKDQPVILQ LLEVPVEGPQ KALKGVMMEL
DDCAFPLLVE MTAHSDPMTA FKDADYALLV GSRPRGPGME RAELLAVNGA IFTAQGKALN
AVASRDVRVL VVGNPANTNA YIAMKSAPDL PAKNFTAMLR LDHNRAASQI AAKTGKAVAD
IEKLTVWGNH SPTMYADYRF ATIGGESVAQ MINDQEWNAN VFLPTVGKRG AAIIEARGSS
SAASAANAAI DHMRDWALGT NGKWVTMGIP SGGEYGIPAE TMFGFPVTCE NGEYKIVEGL
EIDAFSQERI NITLAELEGE KAGVAHLL
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